RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
CLN6-208ENST00000567060 LEXMQ3ZCV2 418 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 TGS1Q96RS0 853 aaKnown RBP18.34■□□□□ 0.53
CLN6-208ENST00000567060 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 OSBPL7Q9BZF2 842 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 TMEM206Q9H813 350 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 TBX20Q9UMR3 447 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 PIN4Q9Y237 131 aaKnown RBP18.34■□□□□ 0.53
CLN6-208ENST00000567060 TRIOO75962 3097 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 TTC3P53804 2025 aa18.33■□□□□ 0.53
CLN6-208ENST00000567060 A0A0U1RQF3 1178 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 ENPP3O14638 875 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 KLRC4O43908 158 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 ZNF623O75123 536 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 EOMESO95936 686 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 STAG3L1P0CL83 205 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 ARF4P18085 180 aaPredicted RBP18.33■□□□□ 0.52
CLN6-208ENST00000567060 HOXA11P31270 313 aaPredicted RBP18.33■□□□□ 0.52
CLN6-208ENST00000567060 SNRPFP62306 86 aaKnown RBP18.33■□□□□ 0.52
CLN6-208ENST00000567060 NT5DC1Q5TFE4 455 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 GRAMD1CQ8IYS0 662 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 HACE1Q8IYU2 909 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 GJD3Q8N144 294 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 ADAM2Q99965 735 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 ADPGKQ9BRR6 497 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 KIFC3Q9BVG8 833 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 TNFSF13BQ9Y275 285 aa18.33■□□□□ 0.52
CLN6-208ENST00000567060 C5orf42Q9H799 3197 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 C9IYK1 514 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 GCNT3O95395 438 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 SARSP49591 514 aaKnown RBP18.32■□□□□ 0.52
CLN6-208ENST00000567060 FAM189BP81408 668 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 DCAF4L1Q3SXM0 396 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
CLN6-208ENST00000567060 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
CLN6-208ENST00000567060 FAM117BQ6P1L5 589 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 SLC27A1Q6PCB7 646 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 TAS1R3Q7RTX0 852 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
CLN6-208ENST00000567060 SMARCE1Q969G3 411 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 ACCSQ96QU6 501 aa18.32■□□□□ 0.52
CLN6-208ENST00000567060 ZMYM2Q9UBW7 1377 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 HOXA2O43364 376 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 CSDE1O75534 798 aaKnown RBP18.31■□□□□ 0.52
CLN6-208ENST00000567060 TOM1L1O75674 476 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 IL9P15248 144 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 FGFR4P22455 802 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 KCNA5P22460 613 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
CLN6-208ENST00000567060 PPP1R2P41236 205 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 HSP90AA2PQ14568 343 aaPredicted RBP18.31■□□□□ 0.52
CLN6-208ENST00000567060 KYAT1Q16773 422 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 BMT2Q1RMZ1 405 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 TMEM132AQ24JP5 1023 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 ATF7IP2Q5U623 682 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 SLFN12LQ6IEE8 588 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-208ENST00000567060 NPAS4Q8IUM7 802 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
CLN6-208ENST00000567060 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
CLN6-208ENST00000567060 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
CLN6-208ENST00000567060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.3■□□□□ 0.52
CLN6-208ENST00000567060 PRR29P0C7W0 189 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 PNOCQ13519 176 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 COBLL1Q53SF7 1204 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 EPM2AIP1Q7L775 607 aaPredicted RBP18.3■□□□□ 0.52
CLN6-208ENST00000567060 RTN4RL1Q86UN2 441 aaPredicted RBP18.3■□□□□ 0.52
CLN6-208ENST00000567060 TRIML1Q8N9V2 468 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 TOP1MTQ969P6 601 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 PGBD4Q96DM1 585 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 NUP62CLQ9H1M0 184 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 PCDHA5Q9Y5H7 936 aa18.3■□□□□ 0.52
CLN6-208ENST00000567060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 GRXCR2A6NFK2 248 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 B4GALT5O43286 388 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 MGEA5O60502 916 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 PROZP22891 400 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 CASP1P29466 404 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 LIG4P49917 911 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 POU5F1Q01860 360 aaKnown RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 PTCRAQ6ISU1 281 aaPredicted RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 MPZL3Q6UWV2 235 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 MRPL10Q7Z7H8 261 aaKnown RBP18.29■□□□□ 0.52
CLN6-208ENST00000567060 ECHDC2Q86YB7 292 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 BICD1Q96G01 975 aa18.29■□□□□ 0.52
CLN6-208ENST00000567060 TRIM6Q9C030 488 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms