RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MAGEF1Q9HAY2 307 aa14.76□□□□□ -0.05
CLK3-218ENST00000566926 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
CLK3-218ENST00000566926 PRDM6Q9NQX0 595 aa14.76□□□□□ -0.05
CLK3-218ENST00000566926 TLR9Q9NR96 1032 aa14.76□□□□□ -0.05
CLK3-218ENST00000566926 LARSQ9P2J5 1176 aaKnown RBP14.76□□□□□ -0.05
CLK3-218ENST00000566926 ODF2LQ9ULJ1 636 aa14.76□□□□□ -0.05
CLK3-218ENST00000566926 TCF20Q9UGU0 1960 aaKnown RBP14.76□□□□□ -0.05
CLK3-218ENST00000566926 FSD2A1L4K1 749 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 NPTXRO95502 500 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 PLS3P13797 630 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 PLCG1P19174 1290 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 SCP2P22307 547 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 NPTX2P47972 431 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 BCAR1P56945 870 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 GRIN1Q05586 938 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
CLK3-218ENST00000566926 DCAF4L1Q3SXM0 396 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 TCEAL5Q5H9L2 206 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 TJAP1Q5JTD0 557 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 DAW1Q8N136 415 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
CLK3-218ENST00000566926 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 NTPCRQ9BSD7 190 aaKnown RBP14.75□□□□□ -0.05
CLK3-218ENST00000566926 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
CLK3-218ENST00000566926 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 POLD4Q9HCU8 107 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 STK39Q9UEW8 545 aa14.75□□□□□ -0.05
CLK3-218ENST00000566926 NCOR1O75376 2440 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 INPPL1O15357 1258 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLK3-218ENST00000566926 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
CLK3-218ENST00000566926 MAPK7Q13164 816 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 RRAGBQ5VZM2 374 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 GPBP1Q86WP2 473 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 CEP57L1Q8IYX8 460 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 SLC39A11Q8N1S5 342 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 RAD54LQ92698 747 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 ASB2Q96Q27 587 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 TMEM175Q9BSA9 504 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
CLK3-218ENST00000566926 NRDE2Q9H7Z3 1164 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
CLK3-218ENST00000566926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 POLR2DO15514 142 aaKnown RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 CAVIN2O95810 425 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 ALDH2P05091 517 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 MYL1P05976 194 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 SLFN14P0C7P3 912 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 DNAJB1P25685 340 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 ABCD1P33897 745 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 RAD51AP2Q09MP3 1159 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 STRN3Q13033 797 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 CAMK1Q14012 370 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 DHX8Q14562 1220 aaKnown RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 MCM6Q14566 821 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 GSE1Q14687 1217 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 KRBA2Q6ZNG9 492 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 PABPC5Q96DU9 382 aaKnown RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 RPS6KC1Q96S38 1066 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 KIFC3Q9BVG8 833 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 APOL6Q9BWW8 343 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 GBP3Q9H0R5 595 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 NXF3Q9H4D5 531 aaKnown RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 PDZD7Q9H5P4 517 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 UBE2ZQ9H832 354 aaPredicted RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 NGRNQ9NPE2 291 aaKnown RBP14.73□□□□□ -0.05
CLK3-218ENST00000566926 PARP2Q9UGN5 583 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 TNFSF13BQ9Y275 285 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 HES2Q9Y543 173 aa14.73□□□□□ -0.05
CLK3-218ENST00000566926 REV3LO60673 3130 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 SYCE3A1L190 88 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 ARL5CA6NH57 179 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 SFI1A8K8P3 1242 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 SLC16A4O15374 487 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 TBCAO75347 108 aaKnown RBP14.72□□□□□ -0.05
CLK3-218ENST00000566926 FAM13AO94988 1023 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 POMCP01189 267 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 GALTP07902 379 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 MLH1P40692 756 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 LRSAM1Q6UWE0 723 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 TMC7Q7Z402 723 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 CDR2LQ86X02 465 aaPredicted RBP14.72□□□□□ -0.05
CLK3-218ENST00000566926 GAD1Q99259 594 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 CDCA3Q99618 268 aaPredicted RBP14.72□□□□□ -0.05
CLK3-218ENST00000566926 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
CLK3-218ENST00000566926 FAN1Q9Y2M0 1017 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms