RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ODR4Q5SWX8 454 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 TTC27Q6P3X3 843 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 GRAMD1AQ96CP6 724 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ELAC2Q9BQ52 826 aaKnown RBP23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ACTL7BQ9Y614 415 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 BMP3P12645 472 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 CYP2J2P51589 502 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 SIX1Q15475 284 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ARHGAP44Q17R89 818 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 MIGA2Q7L4E1 593 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 SIAH1Q8IUQ4 282 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 TPH2Q8IWU9 490 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 CCDC105Q8IYK2 499 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ANKRD27Q96NW4 1050 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ZC3H12CQ9C0D7 883 aaKnown RBP23.17■■□□□ 1.3
SPSB3-208ENST00000566339 ST6GALNAC4Q9H4F1 302 aa23.17■■□□□ 1.3
SPSB3-208ENST00000566339 COL2A1P02458 1487 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-208ENST00000566339 OPLAHO14841 1288 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 BACH1O14867 736 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 FSCN2O14926 492 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 VAMP7P51809 220 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 EXOC3L1Q86VI1 746 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 FAM71AQ8IYT1 594 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 RPUSD2Q8IZ73 545 aaKnown RBP23.16■■□□□ 1.3
SPSB3-208ENST00000566339 MAB21L3Q8N8X9 362 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 SLC17A8Q8NDX2 589 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 GRK7Q8WTQ7 553 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 KRT35Q92764 455 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 N4BP2L2Q92802 583 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-208ENST00000566339 RSRC1Q96IZ7 334 aaKnown RBP23.16■■□□□ 1.3
SPSB3-208ENST00000566339 IWS1Q96ST2 819 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 TIPINQ9BVW5 301 aa23.16■■□□□ 1.3
SPSB3-208ENST00000566339 UBE2TQ9NPD8 197 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-208ENST00000566339 GJB6O95452 261 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 NDUFB10O96000 172 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 TRIM49P0CI25 452 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 TRIM49CP0CI26 452 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 NQO1P15559 274 aaKnown RBP23.15■■□□□ 1.3
SPSB3-208ENST00000566339 YY1P25490 414 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 ENPEPQ07075 957 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 RHBDF2Q6PJF5 856 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 B3GNT9Q6UX72 402 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 SYCP3Q8IZU3 236 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 BBOF1Q8ND07 529 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 PIGOQ8TEQ8 1089 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 UIMC1Q96RL1 719 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 FOXP3Q9BZS1 431 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 ARL2BPQ9Y2Y0 163 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 CEP83Q9Y592 693 aa23.15■■□□□ 1.3
SPSB3-208ENST00000566339 RBBP6Q7Z6E9 1792 aaKnown RBP23.15■■□□□ 1.3
SPSB3-208ENST00000566339 SFI1A8K8P3 1242 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 CCDC15Q0P6D6 951 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 PALB2Q86YC2 1186 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 RELL1Q8IUW5 271 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 EPS8L3Q8TE67 593 aaKnown RBP23.14■■□□□ 1.3
SPSB3-208ENST00000566339 CKAP2Q8WWK9 683 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 FAM81BQ96LP2 452 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 ACCSQ96QU6 501 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 LARSQ9P2J5 1176 aaKnown RBP23.14■■□□□ 1.3
SPSB3-208ENST00000566339 LGALS13Q9UHV8 139 aa23.14■■□□□ 1.3
SPSB3-208ENST00000566339 NOCTQ9UK39 431 aaKnown RBP23.14■■□□□ 1.3
SPSB3-208ENST00000566339 RIMBP2O15034 1052 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 COPB2P35606 906 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 CRKP46108 304 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 BNIP1Q12981 228 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 COG2Q14746 738 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 ADAT2Q7Z6V5 191 aaKnown RBP23.14■■□□□ 1.29
SPSB3-208ENST00000566339 MIEF2Q96C03 454 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 RIT2Q99578 217 aa23.14■■□□□ 1.29
SPSB3-208ENST00000566339 EMSYQ7Z589 1322 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 ARHGEF35A5YM69 484 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 GAS7O60861 476 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 RARAP10276 462 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 PYGMP11217 842 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 CCND1P24385 295 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 ACVR2BQ13705 512 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 PTK6Q13882 451 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 MESDQ14696 234 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 ZDHHC14Q8IZN3 488 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 RIBC1Q8N443 379 aaPredicted RBP23.13■■□□□ 1.29
SPSB3-208ENST00000566339 ZNF564Q8TBZ8 553 aaPredicted RBP23.13■■□□□ 1.29
SPSB3-208ENST00000566339 EPS8L1Q8TE68 723 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 SLC20A1Q8WUM9 679 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 DYDC1Q8WWB3 177 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 ARHGEF2Q92974 986 aaKnown RBP23.13■■□□□ 1.29
SPSB3-208ENST00000566339 WDR18Q9BV38 432 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 TEKT3Q9BXF9 490 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 BAIAP2L1Q9UHR4 511 aa23.13■■□□□ 1.29
SPSB3-208ENST00000566339 SPOPO43791 374 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 ATP2C2O75185 946 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 WFS1O76024 890 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 NPR1P16066 1061 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 MFAP3P55082 362 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
SPSB3-208ENST00000566339 ABCB5Q2M3G0 1257 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 RNF207Q6ZRF8 634 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.12■■□□□ 1.29
SPSB3-208ENST00000566339 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 CDC42EP4Q9H3Q1 356 aaKnown RBP23.12■■□□□ 1.29
SPSB3-208ENST00000566339 LRRN2O75325 713 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms