RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 NXF3Q9H4D5 531 aaKnown RBP18.34■□□□□ 0.53
TSR3-202ENST00000566296 TTC12Q9H892 705 aaPredicted RBP18.34■□□□□ 0.53
TSR3-202ENST00000566296 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
TSR3-202ENST00000566296 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
TSR3-202ENST00000566296 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.34■□□□□ 0.533e-9■■□□□ 12.7
TSR3-202ENST00000566296 IGSF9Q9P2J2 1179 aa18.34■□□□□ 0.53
TSR3-202ENST00000566296 RIF1Q5UIP0 2472 aaKnown RBP18.34■□□□□ 0.53
TSR3-202ENST00000566296 ZFHX2Q9C0A1 2572 aaPredicted RBP18.34■□□□□ 0.53
TSR3-202ENST00000566296 USO1O60763 962 aaKnown RBP18.33■□□□□ 0.52
TSR3-202ENST00000566296 GLRA2P23416 452 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 GBP2P32456 591 aaPredicted RBP18.33■□□□□ 0.52
TSR3-202ENST00000566296 ARL2P36404 184 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 RARRES1P49788 294 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 GRIK3Q13003 919 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 TRIM29Q14134 588 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 AMHR2Q16671 573 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 CWF19L1Q69YN2 538 aaKnown RBP18.33■□□□□ 0.52
TSR3-202ENST00000566296 FUT10Q6P4F1 479 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 TNFRSF25Q93038 417 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 HSD17B14Q9BPX1 270 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 RHOBTB2Q9BYZ6 727 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 KCNK12Q9HB15 430 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 DOCK8Q8NF50 2099 aa18.33■□□□□ 0.52
TSR3-202ENST00000566296 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.52
TSR3-202ENST00000566296 CCDC195A0A1B0GUA6 201 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 PROB1E7EW31 1015 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 NPTXRO95502 500 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 TXKP42681 527 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 FOSBP53539 338 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 CREMQ03060 361 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 KIAA0319Q5VV43 1072 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 SLC27A1Q6PCB7 646 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 TAS1R1Q7RTX1 841 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
TSR3-202ENST00000566296 HDAC7Q8WUI4 952 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 SMG7Q92540 1137 aaKnown RBP18.32■□□□□ 0.52
TSR3-202ENST00000566296 GTF3C6Q969F1 213 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 PIDD1Q9HB75 910 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 WDR6Q9NNW5 1121 aaKnown RBP18.32■□□□□ 0.52
TSR3-202ENST00000566296 MIOSQ9NXC5 875 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
TSR3-202ENST00000566296 LRRIQ4A6NIV6 560 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 B4GALT5O43286 388 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
TSR3-202ENST00000566296 AOC1P19801 751 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 RFX1P22670 979 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 NBL1P41271 181 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 USP41Q3LFD5 358 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 GPR65Q8IYL9 337 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 PLEKHA4Q9H4M7 779 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 ADAM28Q9UKQ2 775 aa18.31■□□□□ 0.52
TSR3-202ENST00000566296 POTEMA6NI47 508 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 F8W810 466 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 RFPL2O75678 378 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 EFEMP2O95967 443 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 C1RP00736 705 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 MYBP10242 640 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 AKAP5P24588 427 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 ME3Q16798 604 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 TMEM132AQ24JP5 1023 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
TSR3-202ENST00000566296 SIX5Q8N196 739 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 NSUN7Q8NE18 718 aaKnown RBP18.3■□□□□ 0.52
TSR3-202ENST00000566296 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 RIN2Q8WYP3 895 aaPredicted RBP18.3■□□□□ 0.52
TSR3-202ENST00000566296 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 CHST7Q9NS84 486 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 PRMT7Q9NVM4 692 aaPredicted RBP18.3■□□□□ 0.52
TSR3-202ENST00000566296 ZDHHC7Q9NXF8 308 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 KLK14Q9P0G3 267 aa18.3■□□□□ 0.52
TSR3-202ENST00000566296 SF3B1O75533 1304 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSR3-202ENST00000566296 A0A1B0GUA9 196 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 LARGE1O95461 756 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSR3-202ENST00000566296 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 MAEAQ7L5Y9 396 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 PALB2Q86YC2 1186 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 GLYCTKQ8IVS8 523 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 CCDC105Q8IYK2 499 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 B3GALT6Q96L58 329 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 GPR62Q9BZJ7 368 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 C2orf40Q9H1Z8 148 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 FNIP2Q9P278 1114 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 EPS15L1Q9UBC2 864 aa18.29■□□□□ 0.52
TSR3-202ENST00000566296 USP34Q70CQ2 3546 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 PRR23AA6NEV1 266 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 TGM5O43548 720 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
TSR3-202ENST00000566296 TADA2AO75478 443 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 SPATA31D3P0C874 917 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
TSR3-202ENST00000566296 SAFBQ15424 915 aaKnown RBP eCLIP18.28■□□□□ 0.52
TSR3-202ENST00000566296 SPATA31D4Q6ZUB0 917 aa18.28■□□□□ 0.52
TSR3-202ENST00000566296 GET4Q7L5D6 327 aaPredicted RBP18.28■□□□□ 0.52
TSR3-202ENST00000566296 GSTCDQ8NEC7 633 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms