RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 P4HBP07237 508 aaKnown RBP14.92□□□□□ -0.02
COMMD4-214ENST00000566230 MLH1P40692 756 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 RFC5P40937 340 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 SCNN1GP51170 649 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 SSRP1Q08945 709 aaKnown RBP14.92□□□□□ -0.02
COMMD4-214ENST00000566230 FERMT3Q86UX7 667 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 TRIM22Q8IYM9 498 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 KIAA2013Q8IYS2 634 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 RNF149Q8NC42 400 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 ZFP42Q96MM3 310 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 AIFM3Q96NN9 605 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 GPR62Q9BZJ7 368 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 PLEKHA4Q9H4M7 779 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 KCNMB3Q9NPA1 279 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 UBN1Q9NPG3 1134 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 TPCN1Q9ULQ1 816 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 PPME1Q9Y570 386 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 CACNA1BQ00975 2339 aa14.92□□□□□ -0.02
COMMD4-214ENST00000566230 ASAP2O43150 1006 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 TSPAN1O60635 241 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 CDKL5O76039 1030 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 C1RP00736 705 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 SP9P0CG40 484 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 RFX1P22670 979 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 HTR4Q13639 388 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 EMC2Q15006 297 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 ELMSAN1Q6PJG2 1045 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 GLYCTKQ8IVS8 523 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 C4orf19Q8IY42 314 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 EXOC8Q8IYI6 725 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 GSTCDQ8NEC7 633 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 RPP25Q9BUL9 199 aaKnown RBP14.91□□□□□ -0.02
COMMD4-214ENST00000566230 PRKD2Q9BZL6 878 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 ARHGEF3Q9NR81 526 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 SLC2A4RGQ9NR83 387 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.91□□□□□ -0.022e-7■■□□□ 14.4
COMMD4-214ENST00000566230 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 SIT1Q9Y3P8 196 aa14.91□□□□□ -0.02
COMMD4-214ENST00000566230 COL4A3Q01955 1670 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 NOTCH4Q99466 2003 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 POTEMA6NI47 508 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 DKC1O60832 514 aaKnown RBP eCLIP14.9□□□□□ -0.02
COMMD4-214ENST00000566230 ERLIN2O94905 339 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 DEXIO95424 95 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 GLULP15104 373 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 RPL17P18621 184 aaKnown RBP14.9□□□□□ -0.02
COMMD4-214ENST00000566230 AXLP30530 894 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 PTENP60484 403 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 STK3Q13188 491 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 AMHR2Q16671 573 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 GET4Q7L5D6 327 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-214ENST00000566230 C1orf210Q8IVY1 113 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 FAM177A1Q8N128 213 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-214ENST00000566230 DCLK2Q8N568 766 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 TCP11Q8WWU5 503 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 HAS1Q92839 578 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 FAM20AQ96MK3 541 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 KIF2CQ99661 725 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 LXNQ9BS40 222 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 CSRNP2Q9H175 543 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 XPNPEP1Q9NQW7 623 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 ZDHHC7Q9NXF8 308 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 FNIP2Q9P278 1114 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 NUMBLQ9Y6R0 609 aa14.9□□□□□ -0.02
COMMD4-214ENST00000566230 LRRN2O75325 713 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 YWHABP31946 246 aaKnown RBP14.89□□□□□ -0.03
COMMD4-214ENST00000566230 SCRN1Q12765 414 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 EPHA7Q15375 998 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 USP41Q3LFD5 358 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 XKR9Q5GH70 373 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 GALNT17Q6IS24 598 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 NOTUMQ6P988 496 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 KRT25Q7Z3Z0 450 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-214ENST00000566230 GPR65Q8IYL9 337 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 MAML2Q8IZL2 1156 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-214ENST00000566230 RABGGTAQ92696 567 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 CCDC51Q96ER9 411 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 ZSCAN31Q96LW9 406 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-214ENST00000566230 APOL6Q9BWW8 343 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 FOXQ1Q9C009 403 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 NXF3Q9H4D5 531 aaKnown RBP14.89□□□□□ -0.03
COMMD4-214ENST00000566230 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 GIT1Q9Y2X7 761 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
COMMD4-214ENST00000566230 ZMYND10O75800 440 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 ARF4P18085 180 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-214ENST00000566230 AKAP5P24588 427 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 STARD6P59095 220 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 GPC5P78333 572 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 SPIRE1Q08AE8 756 aa14.88□□□□□ -0.03
COMMD4-214ENST00000566230 CTTNQ14247 550 aaKnown RBP14.88□□□□□ -0.03
COMMD4-214ENST00000566230 PCBP1Q15365 356 aaKnown RBP eCLIP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms