RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 IKQ13123 557 aaPredicted RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 KHDC1Q4VXA5 237 aaKnown RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 TAOK1Q7L7X3 1001 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 PRELID2Q8N945 189 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 DNAJC19Q96DA6 116 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 RBM41Q96IZ5 413 aaKnown RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 HDAC9Q9UKV0 1011 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 CHKBQ9Y259 395 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 FLOT1O75955 427 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 CNGA1P29973 690 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 TNFAIP8L3Q5GJ75 292 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 CKAP2Q8WWK9 683 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 RIC8AQ9NPQ8 531 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 MEIS1O00470 390 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 LAD1O00515 517 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 EDIL3O43854 480 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CETPP11597 493 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CASP5P51878 434 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 RBM26Q5T8P6 1007 aaKnown RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 DTX3LQ8TDB6 740 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 T-ENOLP0DO92 83 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 SHMT1P34896 483 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 DNAJC3Q13217 504 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 DACT2Q5SW24 774 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 SRRM1Q8IYB3 904 aaKnown RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 SCFD1Q8WVM8 642 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 NRG4Q8WWG1 115 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 PRMT6Q96LA8 375 aaPredicted RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CAMKK2Q96RR4 588 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 CDC42EP4Q9H3Q1 356 aaKnown RBP17.44■□□□□ 0.38
LINC00554-201ENST00000564841 COG5Q9UP83 839 aa17.44■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 NR2F2P24468 414 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 CUL3Q13618 768 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
LINC00554-201ENST00000564841 KRT25Q7Z3Z0 450 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 SLC7A6OSQ96CW6 309 aaPredicted RBP17.43■□□□□ 0.38
LINC00554-201ENST00000564841 FGD4Q96M96 766 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 PITPNM3Q9BZ71 974 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 SH3GLB2Q9NR46 395 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 SLX4Q8IY92 1834 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 CHKAP35790 457 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 RFX8Q6ZV50 586 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 FAM136AQ96C01 138 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 RAB3IPQ96QF0 476 aaPredicted RBP17.43■□□□□ 0.38
LINC00554-201ENST00000564841 ROBO3Q96MS0 1386 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
LINC00554-201ENST00000564841 SERPINB4P48594 390 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 TRIP13Q15645 432 aaPredicted RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 KYNUQ16719 465 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 ZC3H18Q86VM9 953 aaKnown RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 THAP2Q9H0W7 228 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 INTUQ9ULD6 942 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 NAV1Q8NEY1 1877 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 ATP9AO75110 1047 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 SPAG7O75391 227 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 UBTFL6P0CB48 400 aaPredicted RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 ZCCHC18P0CG32 403 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 ETS2P15036 469 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 CCDC137Q6PK04 289 aaKnown RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 NUMBLQ9Y6R0 609 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 O00370 1275 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 TAC1P20366 129 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 GNA11P29992 359 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 CASP4P49662 377 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 LBRQ14739 615 aaKnown RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 DSTYKQ6XUX3 929 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 FAM81AQ8TBF8 368 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 DNAJC18Q9H819 358 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
LINC00554-201ENST00000564841 PCDHA3Q9Y5H8 950 aa17.42■□□□□ 0.38
LINC00554-201ENST00000564841 NVLO15381 856 aaKnown RBP17.41■□□□□ 0.38
LINC00554-201ENST00000564841 TTLL1O95922 423 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00554-201ENST00000564841 SYCE1Q8N0S2 351 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 IFT43Q96FT9 208 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 ZNF333Q96JL9 665 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 FAM198AQ9UFP1 575 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 MTRF1LQ9UGC7 380 aaKnown RBP17.41■□□□□ 0.38
LINC00554-201ENST00000564841 KIAA1024Q9UPX6 916 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 LAMB1P07942 1786 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms