RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 GPS2Q13227 327 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 KIAA0753Q2KHM9 967 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SUPT20HL1Q3ZLR7 823 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 NOL9Q5SY16 702 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 FAM43BQ6ZT52 329 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 OTUD6AQ7L8S5 288 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 MMGT1Q8N4V1 131 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 NOA1Q8NC60 698 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 NSUN6Q8TEA1 469 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 HVCN1Q96D96 273 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 KLRG1Q96E93 195 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 INPP4AQ96PE3 977 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 OSBPL9Q96SU4 736 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PNKPQ96T60 521 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 STK33Q9BYT3 514 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 MLXIPQ9HAP2 919 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 POLD4Q9HCU8 107 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SIX2Q9NPC8 291 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 RNF146Q9NTX7 359 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 KCNG1Q9UIX4 513 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SCAF8Q9UPN6 1271 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ASTN2O75129 1339 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 A0A0A6YYK5 440 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 CES2O00748 559 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 EXOC3O60645 756 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 SEC31AO94979 1220 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NR3C2P08235 984 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 RHOXF2BP0C7M4 288 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 MYCLP12524 364 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 KRT13P13646 458 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ABCD1P33897 745 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 PTK2Q05397 1052 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 CETN1Q12798 172 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 BFSP1Q12934 665 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 BAATQ14032 418 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 MEI1Q5TIA1 1274 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NSMFQ6X4W1 530 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 CATSPERGQ6ZRH7 1159 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ATCAYQ86WG3 371 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 CAGE1Q8TC20 777 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 DEPDC7Q96QD5 511 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 RHOXF2Q9BQY4 288 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NTPCRQ9BSD7 190 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 MOV10L1Q9BXT6 1211 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 SALL4Q9UJQ4 1053 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 PCDHA10Q9Y5I2 948 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NFASCO94856 1347 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 K7ENM7 598 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ATP9AO75110 1047 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 SASH3O75995 380 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 KLRC1P26715 233 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 SMTNP53814 917 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NCKAP1LP55160 1127 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NAP1L1P55209 391 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 VSNL1P62760 191 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 GLE1Q53GS7 698 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 SYCP2LQ5T4T6 812 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 UTP14CQ5TAP6 766 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ANGEL2Q5VTE6 544 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ALKBH5Q6P6C2 394 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ZNF571Q7Z3V5 609 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 HAUS6Q7Z4H7 955 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 LILRB2Q8N423 598 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ZKSCAN4Q969J2 545 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 TLR10Q9BXR5 811 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 TEX13BQ9BXU2 312 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ABCB6Q9NP58 842 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 GPRC5DQ9NZD1 345 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 NAGPAQ9UK23 515 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 ZNF214Q9UL59 606 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 EXOC7Q9UPT5 735 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 USP20Q9Y2K6 914 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 RLFQ13129 1914 aa7.87□□□□□ -1.15
HERPUD1-209ENST00000564678 GRID2IPA4D2P6 1211 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 LDHAP00338 332 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 TFRCP02786 760 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 SCP2P22307 547 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 BDNFP23560 247 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 SOX5P35711 763 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 MASP1P48740 699 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 CYP2J2P51589 502 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 NPEPPSP55786 919 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 RTP1P59025 263 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 APBA1Q02410 837 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 ENPEPQ07075 957 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 CFAP221Q4G0U5 840 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 FAM26DQ5JW98 314 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 SNRNP48Q6IEG0 339 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 ANKS3Q6ZW76 656 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 GPC2Q8N158 579 aa7.86□□□□□ -1.15
HERPUD1-209ENST00000564678 XXYLT1Q8NBI6 393 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms