RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 GRIN1Q05586 938 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 PPFIA1Q13136 1202 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 FZD5Q13467 585 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 CR1LQ2VPA4 569 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 PAN2Q504Q3 1202 aaKnown RBP6.24□□□□□ -1.41
CHD9-210ENST00000564582 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 FGD2Q7Z6J4 655 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 SAPCD2Q86UD0 394 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 JAZF1Q86VZ6 243 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 LINC00482Q8N8I6 264 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 LINC01356Q8N9X3 169 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 KYQ8NBH2 561 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 KCNG4Q8TDN1 519 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 SCLYQ96I15 445 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 TMEM209Q96SK2 561 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 SH3GL3Q99963 347 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 C11orf84Q9BUA3 381 aaPredicted RBP6.24□□□□□ -1.41
CHD9-210ENST00000564582 PARD6BQ9BYG5 372 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 SLC12A5Q9H2X9 1139 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 TMX1Q9H3N1 280 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 ACTR5Q9H9F9 607 aaPredicted RBP6.24□□□□□ -1.41
CHD9-210ENST00000564582 CBLCQ9ULV8 474 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 TMA7Q9Y2S6 64 aaKnown RBP6.24□□□□□ -1.41
CHD9-210ENST00000564582 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 MRFAP1Q9Y605 127 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 ATP23Q9Y6H3 246 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 ARHGAP5Q13017 1502 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 SYCP2Q9BX26 1530 aa6.24□□□□□ -1.41
CHD9-210ENST00000564582 USP42Q9H9J4 1324 aaKnown RBP6.24□□□□□ -1.41
CHD9-210ENST00000564582 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 MAP3K5Q99683 1374 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 TTC36A6NLP5 189 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 GOLGA8KD6RF30 607 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 H3BQV1 296 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 SHOX2O60902 331 aaPredicted RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 CCDC175P0C221 793 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 SETSIPP0DME0 302 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 GCFC2P16383 781 aaKnown RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 FAHP16930 419 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 PIP4K2AP48426 406 aaPredicted RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 ITGA1P56199 1179 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 LACTBP83111 547 aaPredicted RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 PABPC4Q13310 644 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD9-210ENST00000564582 ADALQ6DHV7 355 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 VASNQ6EMK4 673 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 OSTM1Q86WC4 334 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 TEX11Q8IYF3 940 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CNPY4Q8N129 248 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CISD2Q8N5K1 135 aaKnown RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 CCDC148Q8NFR7 591 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CCHCR1Q8TD31 782 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CLEC4DQ8WXI8 215 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 RILPL2Q969X0 211 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CLIC6Q96NY7 704 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 SDF4Q9BRK5 362 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 PAGR1Q9BTK6 254 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 STK31Q9BXU1 1019 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CD244Q9BZW8 370 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 SPATS2LQ9NUQ6 558 aaKnown RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 INTS7Q9NVH2 962 aaKnown RBP6.23□□□□□ -1.41
CHD9-210ENST00000564582 NTMQ9P121 344 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 VPS18Q9P253 973 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 NRBP1Q9UHY1 535 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 CDC23Q9UJX2 597 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 COQ6Q9Y2Z9 468 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 LRRC7Q96NW7 1537 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 PLCH2O75038 1416 aa6.23□□□□□ -1.41
CHD9-210ENST00000564582 DEPDC5O75140 1603 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 ZCCHC11Q5TAX3 1644 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 LMTK2Q8IWU2 1503 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 CTAGE15A4D2H0 777 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 KLHL33A6NCF5 533 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 FSBPO95073 299 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 LRG1P02750 347 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 LTFP02788 710 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 CTAGE8P0CG41 777 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 TOP1P11387 765 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 SH3BGRP55822 239 aaPredicted RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 CKAP4Q07065 602 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 SMAD4Q13485 552 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 RBBP5Q15291 538 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 BEND6Q5SZJ8 279 aaPredicted RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 BTBD8Q5XKL5 378 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 TRIM65Q6PJ69 517 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 BLOC1S2Q6QNY1 142 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 OLFM4Q6UX06 510 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 UBE2R2Q712K3 238 aaPredicted RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 CTAGE6Q86UF2 777 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 ARHGEF25Q86VW2 580 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 NBPF5PQ86XG9 351 aaPredicted RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 CTAGE4Q8IX94 777 aa6.22□□□□□ -1.41
CHD9-210ENST00000564582 RBM12BQ8IXT5 1001 aaKnown RBP6.22□□□□□ -1.41
CHD9-210ENST00000564582 PRPF38AQ8NAV1 312 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms