RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 SYTL5Q8TDW5 730 aaPredicted RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 ZNF526Q8TF50 670 aaPredicted RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 CPA5Q8WXQ8 436 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 RAPGEF5Q92565 580 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 CYFIP2Q96F07 1278 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 STRA6Q9BX79 667 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 DBR1Q9UK59 544 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 INTUQ9ULD6 942 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 ICAM1P05362 532 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 PPP2R2AP63151 447 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 MTMR2Q13614 643 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 RASA3Q14644 834 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 SEZ6Q53EL9 994 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 SCARA3Q6AZY7 606 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 SPOPLQ6IQ16 392 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 DEFB132Q7Z7B7 95 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 ZNF564Q8TBZ8 553 aaPredicted RBP14.5□□□□□ -0.09
CLK3-215ENST00000564353 MGARPQ8TDB4 240 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 FEM1BQ9UK73 627 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
CLK3-215ENST00000564353 O00370 1275 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 WNT10BO00744 389 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 HGSO14964 777 aaPredicted RBP14.5□□□□□ -0.09
CLK3-215ENST00000564353 GJB6O95452 261 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 PMS2P54278 862 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 TNIP1Q15025 636 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 ZDHHC24Q6UX98 284 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 POMGNT1Q8WZA1 660 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 ZSWIM1Q9BR11 485 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 HEMGNQ9BXL5 484 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 MTFR1LQ9H019 292 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 CARD9Q9H257 536 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
CLK3-215ENST00000564353 SLC12A6Q9UHW9 1150 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 GGT7Q9UJ14 662 aa14.5□□□□□ -0.09
CLK3-215ENST00000564353 KIAA0391O15091 583 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 CNGA1P29973 690 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 NPTX2P47972 431 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 FKBP1AP62942 108 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 FMO1Q01740 532 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 FAM212AQ96EL1 285 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 BICD1Q96G01 975 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 CAMKK2Q96RR4 588 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 RIT2Q99578 217 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 FAM213AQ9BRX8 229 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 EPB41L4BQ9H329 900 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 FAM114A2Q9NRY5 505 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 ZDHHC18Q9NUE0 388 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 ACSL3O95573 720 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 CFHP08603 1231 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 RARAP10276 462 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 HARSP12081 509 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 PTGER2P43116 358 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 LRRC14Q15048 493 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 ANO5Q75V66 913 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 UBL4BQ8N7F7 174 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 RNF217Q8TC41 542 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 RAB17Q9H0T7 212 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 TMEM206Q9H813 350 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 KLHL11Q9NVR0 708 aa14.49□□□□□ -0.09
CLK3-215ENST00000564353 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
CLK3-215ENST00000564353 GMNCA6NCL1 334 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 MEFVO15553 781 aaPredicted RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 CYP11B1P15538 503 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 SSR1P43307 286 aaKnown RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 HSD17B4P51659 736 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 FAM182AQ5T1J6 154 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 RUFY4Q6ZNE9 571 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 CEP170P1Q96L14 293 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 PSMD1Q99460 953 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 DDX23Q9BUQ8 820 aaKnown RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 GABBR1Q9UBS5 961 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 NOCTQ9UK39 431 aaKnown RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 MYH11P35749 1972 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 ADGRA3Q8IWK6 1321 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 FAM107AO95990 144 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 WNT7BP56706 349 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 BAATQ14032 418 aaPredicted RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 PGM5Q15124 567 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 SEL1L2Q5TEA6 688 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 DENND2CQ68D51 928 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 LRIG3Q6UXM1 1119 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 CPLX4Q7Z7G2 160 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 FAM160B2Q86V87 743 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 PRPF38AQ8NAV1 312 aaKnown RBP14.48□□□□□ -0.09
CLK3-215ENST00000564353 HERPUD2Q9BSE4 406 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 GRHL1Q9NZI5 618 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 RPTORQ8N122 1335 aa14.48□□□□□ -0.09
CLK3-215ENST00000564353 HNRNPDLO14979 420 aaKnown RBP14.47□□□□□ -0.09
CLK3-215ENST00000564353 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
CLK3-215ENST00000564353 PRKG1Q13976 671 aa14.47□□□□□ -0.09
CLK3-215ENST00000564353 PPP1R7Q15435 360 aa14.47□□□□□ -0.09
CLK3-215ENST00000564353 B4GALNT4Q76KP1 1039 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms