RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 BPIFB4P59827 614 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 WDR72Q3MJ13 1102 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CFAP157Q5JU67 520 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 VPS52Q8N1B4 723 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 ARHGAP18Q8N392 663 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CABLES1Q8TDN4 633 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 LRRC27Q9C0I9 530 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 KCTD10Q9H3F6 313 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 A6NJR5 290 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 GYG2O15488 501 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 MESDQ14696 234 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 LIN52Q52LA3 116 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 NLRP9Q7RTR0 991 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 MRRFQ96E11 262 aaKnown RBP13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 UBA5Q9GZZ9 404 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 KRT82Q9NSB4 513 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 EXOC3O60645 756 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 CHRNB2P17787 502 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 AP1B1Q10567 949 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 TRIM42Q8IWZ5 723 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 CCDC65Q8IXS2 484 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 NUMBLQ9Y6R0 609 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 GLI3P10071 1580 aa13.19□□□□□ -0.3
SCAMP2-204ENST00000563829 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 PYGMP11217 842 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 DESP17661 470 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CTNNA2P26232 953 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 GNA11P29992 359 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 THOC5Q13769 683 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 REXO1Q8N1G1 1221 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 C9orf72Q96LT7 481 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 DCP1AQ9NPI6 582 aaPredicted RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 TMCO1Q9UM00 188 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 LMNB1P20700 586 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CASP5P51878 434 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 KRT17Q04695 432 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 EPHA7Q15375 998 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 IZUMO2Q6UXV1 221 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CCDC22O60826 627 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CDH16O75309 829 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 TNFAIP3P21580 790 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 ABCD1P33897 745 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CASP4P49662 377 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 JAM2P57087 298 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 OVGP1Q12889 678 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 GRM4Q14833 912 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 GPBP1Q86WP2 473 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 C4orf33Q8N1A6 199 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 NMD3Q96D46 503 aaKnown RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
SCAMP2-204ENST00000563829 NCANO14594 1321 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 GSC2O15499 205 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 OPHN1O60890 802 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 AKAP3O75969 853 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 HSPA6P17066 643 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 LSAMPQ13449 338 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 CLUL1Q15846 466 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 CPNE8Q86YQ8 564 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 RIBC1Q8N443 379 aaPredicted RBP13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
SCAMP2-204ENST00000563829 BTBD10Q9BSF8 475 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms