RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 MRPS35P82673 323 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 MAPK7Q13164 816 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 C10orf76Q5T2E6 689 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 ARHGEF18Q6ZSZ5 1173 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PIGWQ7Z7B1 504 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 ABTB1Q969K4 478 aaPredicted RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 BTBD6Q96KE9 485 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 MYLK2Q9H1R3 596 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SUCLA2Q9P2R7 463 aaPredicted RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PLA2G4BP0C869 781 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 HARSP12081 509 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SKIP12755 728 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 ETS2P15036 469 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 MARCKSL1P49006 195 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 POU5F1Q01860 360 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 CTTNQ14247 550 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SEC14L1Q92503 715 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 LZTS2Q9BRK4 669 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 TDRD3Q9H7E2 651 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 RHBDL2Q9NX52 303 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 STXBP5LQ9Y2K9 1186 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 BZW2Q9Y6E2 419 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 RREB1Q92766 1687 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 CA4P22748 312 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RIPK1Q13546 671 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 AUHQ13825 339 aaKnown RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RCN1Q15293 331 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 SYT15Q9BQS2 421 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 HEMGNQ9BXL5 484 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 VPS37BQ9H9H4 285 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RXFP1Q9HBX9 757 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 PARP2Q9UGN5 583 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 TRIM49P0CI25 452 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 TRIM49CP0CI26 452 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 CPA2P48052 419 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 CASP4P49662 377 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 OVGP1Q12889 678 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 SLCO1B3Q9NPD5 702 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 DDX3XO00571 662 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 MAPK13O15264 365 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 ECEL1O95672 775 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 PON1P27169 355 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 ICA1Q05084 483 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 ANO7Q6IWH7 933 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 KRT35Q92764 455 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 CDC42EP4Q9H3Q1 356 aaKnown RBP13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RNPEPL1Q9HAU8 725 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 NPHS2Q9NP85 383 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 PCNTO95613 3336 aa13.6□□□□□ -0.23
CCDC187-201ENST00000563590 RIPK2O43353 540 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 AHCYL1O43865 530 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 CALB2P22676 271 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 SGO2Q562F6 1265 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 MDH1BQ5I0G3 518 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 SLFN11Q7Z7L1 901 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 CFAP61Q8NHU2 1237 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 TTC1Q99614 292 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 ZDHHC18Q9NUE0 388 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 DNAJC12Q9UKB3 198 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 CASP5P51878 434 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 MARSP56192 900 aaKnown RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 DEUP1Q05D60 604 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 STRN3Q13033 797 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 PDIA5Q14554 519 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 PDCD2Q16342 344 aaPredicted RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 DCAF12L1Q5VU92 463 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 SLFN13Q68D06 897 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 ZNF365Q70YC5 407 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 CROCCP2Q86T23 111 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 EZH1Q92800 747 aaPredicted RBP13.59□□□□□ -0.23
CCDC187-201ENST00000563590 ARHGEF26Q96DR7 871 aa13.59□□□□□ -0.23
CCDC187-201ENST00000563590 PGM2Q96G03 612 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms