RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FAM135AQ9P2D6 1515 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 CEP152O94986 1710 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ALDH1A2O94788 518 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 LPLP06858 475 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 NPEPPSP55786 919 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 LGALS4P56470 323 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ADAM8P78325 824 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 MEF2AQ02078 507 aaPredicted RBP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 FOXL1Q12952 345 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 SAFB2Q14151 953 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 TRIM25Q14258 630 aaKnown RBP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ACAP1Q15027 740 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 PALM2Q8IXS6 379 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 CMTM4Q8IZR5 234 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 D2HGDHQ8N465 521 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 LMBR1Q8WVP7 490 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ARL8AQ96BM9 186 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 WWC2-AS2Q96NR7 200 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 AGO3Q9H9G7 860 aaKnown RBP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 EVLQ9UI08 416 aaPredicted RBP6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ATP8A1Q9Y2Q0 1164 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 TESMINQ9Y4I5 508 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 A2MP01023 1474 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 PTPRMP28827 1452 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 UBE2QL1A1L167 161 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 CYP27B1O15528 508 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 ACO1P21399 889 aaKnown RBP6.56□□□□□ -1.36
LINC00254-201ENST00000563416 HNRNPMP52272 730 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC00254-201ENST00000563416 WNT3AP56704 352 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 SCAND1P57086 179 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
LINC00254-201ENST00000563416 FAM111BQ6SJ93 734 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 DBX2Q6ZNG2 339 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 LHFPL2Q6ZUX7 228 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 TAS1R1Q7RTX1 841 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 SGMS1Q86VZ5 419 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 DDX42Q86XP3 938 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC00254-201ENST00000563416 LYSMD2Q8IV50 215 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 SLC41A1Q8IVJ1 513 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 PIK3C3Q8NEB9 887 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 AUTS2Q8WXX7 1259 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
LINC00254-201ENST00000563416 C14orf119Q9NWQ9 140 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 MROH1Q8NDA8 1641 aa6.56□□□□□ -1.36
LINC00254-201ENST00000563416 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 C1QTNF3-AMACRE9PGA6 284 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 PRKD3O94806 890 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 POU3F3P20264 500 aaPredicted RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 ZNF662Q6ZS27 426 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 ANKRD35Q8N283 1001 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 FAM126AQ9BYI3 521 aaPredicted RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 PUS7LQ9H0K6 701 aaKnown RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 SLC5A4Q9NY91 659 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 DPP7Q9UHL4 492 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 MYRFQ9Y2G1 1151 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 DAPK1P53355 1430 aa6.55□□□□□ -1.36
LINC00254-201ENST00000563416 ZNF142P52746 1687 aaPredicted RBP6.55□□□□□ -1.36
LINC00254-201ENST00000563416 CFAP65Q6ZU64 1925 aaKnown RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 ADGRL2O95490 1459 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 ABCC5O15440 1437 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 A0A1W2PR48 441 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 CAPN14A8MX76 684 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 PRAMEF4O60810 478 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 LTA4HP09960 611 aaKnown RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 DUSP2Q05923 314 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 ZXDCQ2QGD7 858 aaPredicted RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 GJC2Q5T442 439 aaPredicted RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 FAM180AQ6UWF9 173 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 MAMDC4Q6UXC1 1216 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 TGFBRAP1Q8WUH2 860 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 ORAI2Q96SN7 254 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 QRSL1Q9H0R6 528 aaKnown RBP6.54□□□□□ -1.36
LINC00254-201ENST00000563416 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 TLR9Q9NR96 1032 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 DUOX2Q9NRD8 1548 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 CAMSAP1Q5T5Y3 1602 aa6.54□□□□□ -1.36
LINC00254-201ENST00000563416 K7ESF4 209 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 HIBADHP31937 336 aaKnown RBP6.53□□□□□ -1.36
LINC00254-201ENST00000563416 R3HDM1Q15032 1099 aaKnown RBP6.53□□□□□ -1.36
LINC00254-201ENST00000563416 FKBP15Q5T1M5 1219 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 Q6ZSN1 163 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 ZNF808Q8N4W9 903 aaPredicted RBP6.53□□□□□ -1.36
LINC00254-201ENST00000563416 OR5M3Q8NGP4 307 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 COG1Q8WTW3 980 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 MENTQ9BUN1 341 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 PRDM12Q9H4Q4 367 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 ZBTB21Q9ULJ3 1066 aa6.53□□□□□ -1.36
LINC00254-201ENST00000563416 PRDM15P57071 1507 aaPredicted RBP6.53□□□□□ -1.36
LINC00254-201ENST00000563416 KDM5DQ9BY66 1539 aa6.52□□□□□ -1.37
LINC00254-201ENST00000563416 MYO3AQ8NEV4 1616 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms