RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 UBE2CO00762 179 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 PROM1O43490 865 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 PTP4A3O75365 173 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 RTN3O95197 1032 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 HRGP04196 525 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CHGBP05060 677 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 VIMP08670 466 aaKnown RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 VAV1P15498 845 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 NOS3P29474 1203 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 GRIA2P42262 883 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 EPS15P42566 896 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 SCTRP47872 440 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 LIG3P49916 1009 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 PLTPP55058 493 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ARHGAP8P85298 464 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 LRMPQ12912 555 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 IKQ13123 557 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 ARID5BQ14865 1188 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 FAM110CQ1W6H9 321 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ALG11Q2TAA5 492 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 IYDQ6PHW0 289 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 LILRA6Q6PI73 481 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ZYG11AQ6WRX3 759 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 MARK2Q7KZI7 788 aaKnown RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 UNC45BQ8IWX7 931 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 GDAP1Q8TB36 358 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CHTF18Q8WVB6 975 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ACAP3Q96P50 834 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 UQCC2Q9BRT2 126 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 B3GNT5Q9BYG0 378 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 TRIM5Q9C035 493 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CLIP1P30622 1438 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ZFYVE16Q7Z3T8 1539 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 NUDT19A8MXV4 375 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ACKR2O00590 384 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TRIM38O00635 465 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PRPSAP2O60256 369 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 SUSD5O60279 629 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZEB2O60315 1214 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 OFD1O75665 1012 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 PTPREP23469 700 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 OR1G1P47890 313 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CASP6P55212 293 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 C19orf57Q0VDD7 668 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 BYSLQ13895 437 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZNF792Q3KQV3 632 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ATAT1Q5SQI0 421 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 AADACL4Q5VUY2 407 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 IZUMO3Q5VZ72 239 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 MTFR2Q6P444 385 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TTLL7Q6ZT98 887 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 THAP5Q7Z6K1 395 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 RETREG3Q86VR2 466 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZBTB8BQ8NAP8 495 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 GLIS3Q8NEA6 775 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 SUPT20HQ8NEM7 779 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 ACMSDQ8TDX5 336 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 DIO2Q92813 273 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZNF764Q96H86 408 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 SRCIN1Q9C0H9 1055 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 KLK14Q9P0G3 267 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 DNAJB9Q9UBS3 223 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CCPG1Q9ULG6 757 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TRIM33Q9UPN9 1127 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ASB3Q9Y575 518 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 TRBV23-1A0A0A0MS06 115 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZSCAN9O15535 394 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 SOAT2O75908 522 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 NPTXRO95502 500 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 GSNP06396 782 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 LTA4HP09960 611 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 SCG2P13521 617 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CDH3P22223 829 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PSMA4P25789 261 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 HADHBP55084 474 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 ARL4CP56559 192 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 AUHQ13825 339 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 SH3PXD2AQ5TCZ1 1133 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PM20D1Q6GTS8 502 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PCSK9Q8NBP7 692 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 CLRN3Q8NCR9 226 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CEP70Q8NHQ1 597 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZFAND2BQ8WV99 257 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TEKT5Q96M29 485 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CNTD2Q9H8S5 307 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 LRFN1Q9P244 771 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 KIF17Q9P2E2 1029 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 NDOR1Q9UHB4 597 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TRAV6A0A075B6T7 132 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 A0A1W2PQU0 124 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 HNRNPCL2B2RXH8 293 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 HNRNPCL1O60812 293 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 RNGTTO60942 597 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 SLU7O95391 586 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 MLYCDO95822 493 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 JUPP14923 745 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms