RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ARHGEF26Q96DR7 871 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 TARS2Q9BW92 718 aaKnown RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MROH8Q9H579 483 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 OSGEPQ9NPF4 335 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ST7Q9NRC1 585 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 STYXL1Q9Y6J8 313 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 NCANO14594 1321 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ZNF233A6NK53 670 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 K7ERI5 159 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MAFO75444 373 aaPredicted RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ACOT2P49753 483 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MRPS25P82663 173 aaKnown RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MKRN3Q13064 507 aaKnown RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 CCDC62Q6P9F0 684 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MMGT1Q8N4V1 131 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 GLG1Q92896 1179 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 KCNN1Q92952 543 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 PI4K2AQ9BTU6 479 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 AZI2Q9H6S1 392 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 RAB20Q9NX57 234 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 CLEC11AQ9Y240 323 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 PLXNA1Q9UIW2 1896 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 PLXNB2O15031 1838 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 PIGRP01833 764 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 TMEM253P0C7T8 217 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 GTF2H1P32780 548 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 ITIH3Q06033 890 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 GPR162Q16538 588 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 CRELD2Q6UXH1 353 aaPredicted RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 FAM71AQ8IYT1 594 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 RPUSD2Q8IZ73 545 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 PSPC1Q8WXF1 523 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 TATDN2Q93075 761 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 RBM12Q9NTZ6 932 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 AGO2Q9UKV8 859 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 PTPRJQ12913 1337 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 IQCA1LA6NCM1 817 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 TTLL13PA6NNM8 815 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 NOP56O00567 594 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 CYP26A1O43174 497 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 ATP8B1O43520 1251 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 LGR5O75473 907 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 ABCD1P33897 745 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 MKRN4PQ13434 485 aaPredicted RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 PRPF4BQ13523 1007 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 IFI16Q16666 785 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 NOP9Q86U38 636 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 EPS8L1Q8TE68 723 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 MORC4Q8TE76 937 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 HDAC7Q8WUI4 952 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 SHC3Q92529 594 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 DHX38Q92620 1227 aaKnown RBP20.65■□□□□ 0.9
SMPD3-203ENST00000563226 SPATA33Q96N06 139 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 HINFPQ9BQA5 517 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 THAP2Q9H0W7 228 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 ANKFY1Q9P2R3 1169 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 KCNG1Q9UIX4 513 aa20.65■□□□□ 0.9
SMPD3-203ENST00000563226 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
SMPD3-203ENST00000563226 KIF4AO95239 1232 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 CHRNB2P17787 502 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 PAFAH1B1P43034 410 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 TAF3Q5VWG9 929 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 C15orf39Q6ZRI6 1047 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 SLFN11Q7Z7L1 901 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 SLC47A2Q86VL8 602 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 DHX37Q8IY37 1157 aaKnown RBP20.64■□□□□ 0.89
SMPD3-203ENST00000563226 SLC35G2Q8TBE7 412 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 PRPF31Q8WWY3 499 aaKnown RBP20.64■□□□□ 0.89
SMPD3-203ENST00000563226 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 NT5C1BQ96P26 610 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 PCDHB18PQ96TA0 734 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 LRRC1Q9BTT6 524 aa20.64■□□□□ 0.89
SMPD3-203ENST00000563226 NOCTQ9UK39 431 aaKnown RBP20.64■□□□□ 0.89
SMPD3-203ENST00000563226 ERLIN1O75477 346 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 ZBTB48P10074 688 aaPredicted RBP20.63■□□□□ 0.89
SMPD3-203ENST00000563226 MFAP3P55082 362 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 PSMD6Q15008 389 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 RPS6KA1Q15418 735 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 CFAP221Q4G0U5 840 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 LRRC71Q8N4P6 559 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 PDE11AQ9HCR9 933 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 ADCY3O60266 1144 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 TXNP10599 105 aaKnown RBP20.63■□□□□ 0.89
SMPD3-203ENST00000563226 RNASE9P60153 205 aaKnown RBP20.63■□□□□ 0.89
SMPD3-203ENST00000563226 PLCB4Q15147 1175 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 SEZ6Q53EL9 994 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 USP37Q86T82 979 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 SHCBP1Q8NEM2 672 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 TRAPPC12Q8WVT3 735 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 BBXQ8WY36 941 aaPredicted RBP20.63■□□□□ 0.89
SMPD3-203ENST00000563226 CTNNBL1Q8WYA6 563 aaPredicted RBP20.63■□□□□ 0.89
SMPD3-203ENST00000563226 RFFLQ8WZ73 363 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 ZBTB10Q96DT7 871 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 FAM167AQ96KS9 214 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 STXBP5LQ9Y2K9 1186 aa20.63■□□□□ 0.89
SMPD3-203ENST00000563226 KCNK3O14649 394 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms