RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PDILTQ8N807 584 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 TMEM161BQ8NDZ6 487 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 DEPTORQ8TB45 409 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 CLP1Q92989 425 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 DNAJC19Q96DA6 116 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 PANK2Q9BZ23 570 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 CUEDC2Q9H467 287 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 KBTBD4Q9NVX7 518 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 LARSQ9P2J5 1176 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 HPSEQ9Y251 543 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
CNOT1-204ENST00000563130 PCDHB7Q9Y5E2 793 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 PHLPP2Q6ZVD8 1323 aa6.82□□□□□ -1.32
CNOT1-204ENST00000563130 FRMD3A2A2Y4 597 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SKIP12755 728 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 NCLP19338 710 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 STAT6P42226 847 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 GATMP50440 423 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 NCKAP1LP55160 1127 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CLLU1OSQ5K130 101 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SV2BQ7L1I2 683 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 IQUBQ8NA54 791 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SMG8Q8ND04 991 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CPB2Q96IY4 423 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PARVGQ9HBI0 331 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 KMT5AQ9NQR1 393 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PCDHB2Q9Y5E7 798 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 TCHHQ07283 1943 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 A0A1W2PQ27 194 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 A0A1W2PQ64 194 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 A0A1W2PQD8 194 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CCDC169A6NNP5 214 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 C5orf67F2Z3F1 127 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 K7ERI5 159 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PRKCBP05771 671 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 FGFR1P11362 822 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SCP2P22307 547 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 NCBP1Q09161 790 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PRPF4BQ13523 1007 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 BTG3Q14201 252 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CNNM4Q6P4Q7 775 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SLC27A1Q6PCB7 646 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 AGMOQ6ZNB7 445 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 RSPH1Q8WYR4 309 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 FAM161BQ96MY7 647 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CASD1Q96PB1 797 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 TGS1Q96RS0 853 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 CDX2Q99626 313 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 EIF2AQ9BY44 585 aaKnown RBP6.81□□□□□ -1.32
CNOT1-204ENST00000563130 TMEM117Q9H0C3 514 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 TNMDQ9H2S6 317 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 ST6GALNAC4Q9H4F1 302 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PDZD7Q9H5P4 517 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 GDPD2Q9HCC8 539 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 PTPRHQ9HD43 1115 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 KCNH3Q9ULD8 1083 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 LRFN2Q9ULH4 789 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 SLC27A5Q9Y2P5 690 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 IPPQ9Y573 584 aa6.81□□□□□ -1.32
CNOT1-204ENST00000563130 ABLIM1O14639 778 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 INPPL1O15357 1258 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 SLC16A4O15374 487 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 POLR2DO15514 142 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 TRAK2O60296 914 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 LPXNO60711 386 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 PFKFB1P16118 471 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 PROZP22891 400 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 SMTNP53814 917 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 LRRC55Q6ZSA7 311 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 CDR2LQ86X02 465 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 FIBCD1Q8N539 461 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 DHX58Q96C10 678 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 SAMD11Q96NU1 681 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 PYM1Q9BRP8 204 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 C17orf80Q9BSJ5 609 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 STRA6Q9BX79 667 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 TRIM9Q9C026 710 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 MAGEF1Q9HAY2 307 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 TNFSF13BQ9Y275 285 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 MRPL42Q9Y6G3 142 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 FNDC1Q4ZHG4 1894 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 A0A1B0GVL5 298 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 TBKBP1A7MCY6 615 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 H0YCG3 227 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 TBCAO75347 108 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 OFD1O75665 1012 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 FAM13AO94988 1023 aa6.8□□□□□ -1.32
CNOT1-204ENST00000563130 KRT18P05783 430 aaKnown RBP6.8□□□□□ -1.32
CNOT1-204ENST00000563130 SLFN14P0C7P3 912 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms