RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 BANK1Q8NDB2 785 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 TMEM161BQ8NDZ6 487 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 TOP1MTQ969P6 601 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MRPL4Q9BYD3 311 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 TRIM9Q9C026 710 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 POLR3FQ9H1D9 316 aaPredicted RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 KCNH3Q9ULD8 1083 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 SSX2IPQ9Y2D8 614 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 ATP11BQ9Y2G3 1177 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CITO14578 2027 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 ARHGEF37A1IGU5 675 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TMEM8BA6NDV4 472 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TSPAN1O60635 241 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 PRPF40AO75400 957 aaKnown RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 LETM1O95202 739 aaPredicted RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 IL18RAPO95256 599 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 PPM1AP35813 382 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 STAT6P42226 847 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 MARSP56192 900 aaKnown RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 ERVK-21P61565 698 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 WDR5P61964 334 aaKnown RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 DPYDQ12882 1025 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 SLC27A1Q6PCB7 646 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 ALKAL1Q6UXT8 129 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 CDCA3Q99618 268 aaPredicted RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TRPV6Q9H1D0 765 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 KIAA1024Q9UPX6 916 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 NOD1Q9Y239 953 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 SAMM50Q9Y512 469 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 PCDHB13Q9Y5F0 798 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 FSCN2O14926 492 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 SLC16A3O15427 465 aaKnown RBP6.18□□□□□ -1.42
LINC01963-201ENST00000562038 GTF2H1P32780 548 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 PLCB3Q01970 1234 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 GUCY1B3Q02153 619 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 UBXN11Q5T124 520 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 POTEGQ6S5H5 508 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TPH2Q8IWU9 490 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TMX1Q9H3N1 280 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 CNTN3Q9P232 1028 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 TRAF3IP3Q9Y228 551 aa6.18□□□□□ -1.42
LINC01963-201ENST00000562038 CFAP69A5D8W1 941 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PQBP1O60828 265 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 SMC2O95347 1197 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PFKFB1P16118 471 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ZNF16P17020 682 aaPredicted RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 LAG3P18627 525 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 THPOP40225 353 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 DNM1Q05193 864 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 SNW1Q13573 536 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 CTTNQ14247 550 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 EP400NLQ6ZTU2 488 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 C16orf59Q7L2K0 433 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 CEP57L1Q8IYX8 460 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 GUF1Q8N442 669 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 KHSRPQ92945 711 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ACCSQ96QU6 501 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 RAD9AQ99638 391 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ASB7Q9H672 318 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 BCAS3Q9H6U6 928 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 INSL6Q9Y581 213 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ADGRA3Q8IWK6 1321 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PLXNA4Q9HCM2 1894 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 SZT2Q5T011 3432 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PDXKO00764 312 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ENPP3O14638 875 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 KLRC4O43908 158 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 FAM189A1O60320 539 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 HIP1RO75146 1068 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 TBCAO75347 108 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 RPS6KA5O75582 802 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 TOM1L1O75674 476 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 DGKIO75912 1065 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 LINC00271P0C7V0 271 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 RPL9P32969 192 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 GRIK3Q13003 919 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 MAPK6Q16659 721 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 SKOR2Q2VWA4 1001 aaPredicted RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 MPZL3Q6UWV2 235 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 NYAP1Q6ZVC0 841 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ZNF720Q7Z2F6 126 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ECHDC2Q86YB7 292 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 CKAP2LQ8IYA6 745 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 GPR161Q8N6U8 529 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 NOC3LQ8WTT2 800 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 PRPF31Q8WWY3 499 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 WNT8BQ93098 351 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 CCDC43Q96MW1 224 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 ACO2Q99798 780 aaKnown RBP6.17□□□□□ -1.42
LINC01963-201ENST00000562038 HERC2P3Q9BVR0 1158 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 VRTNQ9H8Y1 702 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 AAASQ9NRG9 546 aa6.17□□□□□ -1.42
LINC01963-201ENST00000562038 RNF19AQ9NV58 838 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms