RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 PTK6Q13882 451 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 RBBP5Q15291 538 aaKnown RBP10.6□□□□□ -0.71
TCF4-211ENST00000561992 GJB7Q6PEY0 223 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 LARGE2Q8N3Y3 721 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 MICAL1Q8TDZ2 1067 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 MRRFQ96E11 262 aaKnown RBP10.6□□□□□ -0.71
TCF4-211ENST00000561992 SNF8Q96H20 258 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
TCF4-211ENST00000561992 MTFR1LQ9H019 292 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
TCF4-211ENST00000561992 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 MYH14Q7Z406 1995 aaKnown RBP10.6□□□□□ -0.71
TCF4-211ENST00000561992 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
TCF4-211ENST00000561992 ZMYM2Q9UBW7 1377 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 MAPK13O15264 365 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 FAM13AO94988 1023 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 NEFHP12036 1026 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 BRAFP15056 766 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ACADSP16219 412 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 RFC4P35249 363 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 POLGP54098 1239 aaPredicted RBP10.59□□□□□ -0.71
TCF4-211ENST00000561992 PABPC4Q13310 644 aaKnown RBP eCLIP10.59□□□□□ -0.71
TCF4-211ENST00000561992 SIX1Q15475 284 aaPredicted RBP10.59□□□□□ -0.71
TCF4-211ENST00000561992 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 AP1ARQ63HQ0 302 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 TXNRD3Q86VQ6 643 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ZNF398Q8TD17 642 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SENP1Q9P0U3 644 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 RABGAP1Q9Y3P9 1069 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ARFGEF1Q9Y6D6 1849 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SPATA31A6Q5VVP1 1343 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 KLHL33A6NCF5 533 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 NDC80O14777 642 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 GAS8O95995 478 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 FTLP02792 175 aaPredicted RBP10.59□□□□□ -0.71
TCF4-211ENST00000561992 CYP1A2P05177 515 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 IL1R1P14778 569 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ATP6V1C1P21283 382 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 COMTP21964 271 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 TM4SF1P30408 202 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SLCO1A2P46721 670 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ALCAMQ13740 583 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 NBPF5PQ86XG9 351 aaPredicted RBP10.59□□□□□ -0.71
TCF4-211ENST00000561992 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.59□□□□□ -0.71
TCF4-211ENST00000561992 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 DCAF4Q8WV16 495 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 ZFAND2BQ8WV99 257 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 TUBB6Q9BUF5 446 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 SBF2Q86WG5 1849 aa10.59□□□□□ -0.71
TCF4-211ENST00000561992 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 SREBF1P36956 1147 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 SNRPFP62306 86 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 CENPCQ03188 943 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 RNASELQ05823 741 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 GRAPQ13588 217 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 RASA2Q15283 850 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 RC3H1Q5TC82 1133 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 ADAT2Q7Z6V5 191 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 DNAAF5Q86Y56 855 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 TDRPQ86YL5 185 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 MFN1Q8IWA4 741 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 GRAPLQ8TC17 118 aaPredicted RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 ETNK1Q9HBU6 452 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 KCNK9Q9NPC2 374 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 GTF3C4Q9UKN8 822 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 MROH7Q68CQ1 1323 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 LRRD1A4D1F6 860 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 FAM47DPA6NHR8 397 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 PRPF4O43172 522 aaKnown RBP eCLIP10.58□□□□□ -0.72
TCF4-211ENST00000561992 CYP3A4P08684 503 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 PYGMP11217 842 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 TAC1P20366 129 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 CNGA1P29973 690 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 COPB2P35606 906 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 BFSP1Q12934 665 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 ZRSR2Q15696 482 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 DDB1Q16531 1140 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 LONRF1Q17RB8 773 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 C12orf56Q8IXR9 622 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
TCF4-211ENST00000561992 KRT35Q92764 455 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 FAM81BQ96LP2 452 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
TCF4-211ENST00000561992 OSBPL1AQ9BXW6 950 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms