RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CLUL1Q15846 466 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 HSCBQ8IWL3 235 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 FAM178BQ8IXR5 827 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 COLGALT2Q8IYK4 626 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 VN1R2Q8NFZ6 395 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 ADPGKQ9BRR6 497 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 NTPCRQ9BSD7 190 aaKnown RBP26.24■■□□□ 1.79
CDR2-202ENST00000561630 ZBP1Q9H171 429 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 TMEM134Q9H6X4 195 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 KMT5AQ9NQR1 393 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 STK39Q9UEW8 545 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 PARP2Q9UGN5 583 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 CD207Q9UJ71 328 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 FAN1Q9Y2M0 1017 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 PHLPP2Q6ZVD8 1323 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 SFI1A8K8P3 1242 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 NRP1O14786 923 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 RAD51AP2Q09MP3 1159 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 KCNC3Q14003 757 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 ATF7IP2Q5U623 682 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 EEF1DP3Q658K8 133 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 LRRC15Q8TF66 581 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 SPIRE2Q8WWL2 714 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 VN1R3Q9BXE9 311 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 KCNG1Q9UIX4 513 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 BARX2Q9UMQ3 279 aaPredicted RBP26.23■■□□□ 1.79
CDR2-202ENST00000561630 IRAK3Q9Y616 596 aa26.23■■□□□ 1.79
CDR2-202ENST00000561630 TCF20Q9UGU0 1960 aaKnown RBP26.23■■□□□ 1.79
CDR2-202ENST00000561630 CXCL14O95715 111 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 CTSAP10619 480 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 PLS3P13797 630 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 MARCKSP29966 332 aaPredicted RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 RBM10P98175 930 aaKnown RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 COASYQ13057 564 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 SMAD4Q13485 552 aaKnown RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 KARSQ15046 597 aaKnown RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 DCAF4L1Q3SXM0 396 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 ARSHQ5FYA8 562 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 TMEM184AQ6ZMB5 413 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 CCSER1Q9C0I3 900 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 BLOC1S4Q9NUP1 217 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 KLK14Q9P0G3 267 aa26.22■■□□□ 1.79
CDR2-202ENST00000561630 FBXO2Q9UK22 296 aaPredicted RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 SRPRBQ9Y5M8 271 aaKnown RBP26.22■■□□□ 1.79
CDR2-202ENST00000561630 MBTPS2O43462 519 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 PLCG1P19174 1290 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 GRIK3Q13003 919 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 SMAD2Q15796 467 aaKnown RBP26.21■■□□□ 1.79
CDR2-202ENST00000561630 TAS1R3Q7RTX0 852 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 SMRP1Q8NCR6 262 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 MARCH5Q9NX47 278 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 SNTG2Q9NY99 539 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 TNFSF13BQ9Y275 285 aa26.21■■□□□ 1.79
CDR2-202ENST00000561630 PRG3Q9Y2Y8 225 aaPredicted RBP26.21■■□□□ 1.79
CDR2-202ENST00000561630 MORC2Q9Y6X9 1032 aaPredicted RBP26.21■■□□□ 1.79
CDR2-202ENST00000561630 SLC16A4O15374 487 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 NR1I2O75469 434 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 OR1G1P47890 313 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 CEBPZQ03701 1054 aaKnown RBP26.2■■□□□ 1.78
CDR2-202ENST00000561630 GIT2Q14161 759 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 RASSF8Q8NHQ8 419 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 EPSTI1Q96J88 318 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 USP28Q96RU2 1077 aa26.2■■□□□ 1.78
CDR2-202ENST00000561630 ACO2Q99798 780 aaKnown RBP26.2■■□□□ 1.78
CDR2-202ENST00000561630 MRPL4Q9BYD3 311 aaKnown RBP26.2■■□□□ 1.78
CDR2-202ENST00000561630 NPHP3-ACAD11A0A0J9YXS1 232 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.19■■□□□ 1.78
CDR2-202ENST00000561630 RECQL4O94761 1208 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 SRGAP2BP0DMP2 458 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 SMTNP53814 917 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 USP49Q70CQ1 688 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 APBB1IPQ7Z5R6 666 aaPredicted RBP26.19■■□□□ 1.78
CDR2-202ENST00000561630 GPBP1Q86WP2 473 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 TMEM161BQ8NDZ6 487 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 AUTS2Q8WXX7 1259 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 RAD54LQ92698 747 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 RPS6KC1Q96S38 1066 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 PTPRHQ9HD43 1115 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 PRKAG3Q9UGI9 489 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 ODF2LQ9ULJ1 636 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 C5orf42Q9H799 3197 aa26.19■■□□□ 1.78
CDR2-202ENST00000561630 CLASP2O75122 1294 aaKnown RBP26.18■■□□□ 1.78
CDR2-202ENST00000561630 CA8P35219 290 aa26.18■■□□□ 1.78
CDR2-202ENST00000561630 SLC39A14Q15043 492 aa26.18■■□□□ 1.78
CDR2-202ENST00000561630 PTPN14Q15678 1187 aa26.18■■□□□ 1.78
CDR2-202ENST00000561630 SPECC1Q5M775 1068 aa26.18■■□□□ 1.78
CDR2-202ENST00000561630 TARS2Q9BW92 718 aaKnown RBP26.18■■□□□ 1.78
CDR2-202ENST00000561630 CD320Q9NPF0 282 aa26.18■■□□□ 1.78
CDR2-202ENST00000561630 LARSQ9P2J5 1176 aaKnown RBP26.18■■□□□ 1.78
CDR2-202ENST00000561630 PTGESO14684 152 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 EFEMP2O95967 443 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 HSP90AA1P07900 732 aaKnown RBP26.17■■□□□ 1.78
CDR2-202ENST00000561630 PDIA4P13667 645 aaKnown RBP26.17■■□□□ 1.78
CDR2-202ENST00000561630 CACNB1Q02641 598 aaPredicted RBP26.17■■□□□ 1.78
CDR2-202ENST00000561630 DHX8Q14562 1220 aaKnown RBP26.17■■□□□ 1.78
CDR2-202ENST00000561630 MCM6Q14566 821 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 LLGL2Q6P1M3 1020 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 GJD3Q8N144 294 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 CLIC6Q96NY7 704 aa26.17■■□□□ 1.78
CDR2-202ENST00000561630 REEP2Q9BRK0 252 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms