RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MLF2Q15773 248 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 CDC37Q16543 378 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 GNPTABQ3T906 1256 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 CRTC2Q53ET0 693 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 ZBTB41Q5SVQ8 909 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 PSAPL1Q6NUJ1 521 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 SLCO4C1Q6ZQN7 724 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 C15orf39Q6ZRI6 1047 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 LRRC55Q6ZSA7 311 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 LRRC43Q8N309 656 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 IL31RAQ8NI17 732 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 APPBP2Q92624 585 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ZBTB10Q96DT7 871 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 KIF1BPQ96EK5 621 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 TMEM169Q96HH4 297 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 CASD1Q96PB1 797 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 MYADMQ96S97 322 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 CELF4Q9BZC1 486 aaKnown RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 PHACTR1Q9C0D0 580 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 CPVLQ9H3G5 476 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 TMEM161AQ9NX61 479 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 PCDHA1Q9Y5I3 950 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 GPC6Q9Y625 555 aaPredicted RBP6.12□□□□□ -1.43
HERC1-213ENST00000561359 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
HERC1-213ENST00000561359 ASXL3Q9C0F0 2248 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 KIAA1217Q5T5P2 1943 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 FREM2Q5SZK8 3169 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 CLUHO75153 1309 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 NT5C1B-RDH14C9J2C7 533 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 M0R2C6 588 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 TM4SF5O14894 197 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 NCAM2O15394 837 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 DHX16O60231 1041 aaKnown RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 RPS6KA5O75582 802 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 CD72P21854 359 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 KLRC2P26717 231 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 ADH6P28332 368 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 HOXA13P31271 388 aaPredicted RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 NOVP48745 357 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 GSK3AP49840 483 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 LIMK1P53667 647 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 PRKCQQ04759 706 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 GIT2Q14161 759 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 PPP2R5DQ14738 602 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 SLC44A4Q53GD3 710 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 RRP12Q5JTH9 1297 aaKnown RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 MARCH8Q5T0T0 291 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 GPATCH4Q5T3I0 446 aaKnown RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 CEP85Q6P2H3 762 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 STOX1Q6ZVD7 989 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 ANKMY2Q8IV38 441 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 SLC39A11Q8N1S5 342 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 RNF169Q8NCN4 708 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 MAP4K1Q92918 833 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 OSBPL6Q9BZF3 934 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 ZBP1Q9H171 429 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 WDR6Q9NNW5 1121 aaKnown RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 LTB4R2Q9NPC1 389 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 PRMT8Q9NR22 394 aaPredicted RBP6.11□□□□□ -1.43
HERC1-213ENST00000561359 RGS18Q9NS28 235 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.11□□□□□ -1.43
HERC1-213ENST00000561359 TELO2Q9Y4R8 837 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 NUMBLQ9Y6R0 609 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 AKAP13Q12802 2813 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
HERC1-213ENST00000561359 CCDC195A0A1B0GUA6 201 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 RRN3P2A6NIE6 340 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 CYSRT1A8MQ03 144 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 GPR182O15218 404 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 RNF113AO15541 343 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 DKK1O94907 266 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 CTSAP10619 480 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 LAMP2P13473 410 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 TCF7P36402 384 aaPredicted RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 NOVA1P51513 510 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 HSD17B4P51659 736 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 BCAR1P56945 870 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 PCBP4P57723 403 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 MTAPQ13126 283 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 HTR4Q13639 388 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 SF3A2Q15428 464 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 QRICH1Q2TAL8 776 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ODR4Q5SWX8 454 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 STPG1Q5TH74 334 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 GET4Q7L5D6 327 aaPredicted RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 FCHSD1Q86WN1 690 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ITPRIPQ8IWB1 547 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ADGRF4Q8IZF3 695 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 SMG7Q92540 1137 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 GATA6Q92908 595 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 CEP63Q96MT8 703 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 KLHL5Q96PQ7 755 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 DDX23Q9BUQ8 820 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 LSM14BQ9BX40 385 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 EMILIN2Q9BXX0 1053 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ELAC1Q9H777 363 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms