RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 H3BRB1 525 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ADCY6O43306 1168 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 EVI5O60447 810 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 CCDC172P0C7W6 258 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 FAM228BP0C875 321 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ZNF865P0CJ78 1059 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 RGS2P41220 211 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 NLRP11P59045 1033 aaKnown RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 PTENP60484 403 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 TNFAIP2Q03169 654 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 DGKDQ16760 1214 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 ERO1AQ96HE7 468 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 GJD2Q9UKL4 321 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 MRFAP1Q9Y605 127 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 MCM3APO60318 1980 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 A6NJR5 290 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 ABLIM1O14639 778 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 PRKCBP05771 671 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 KLRC1P26715 233 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 CLCN3P51790 818 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
SNX1-211ENST00000560829 BMS1Q14692 1282 aaKnown RBP13.98□□□□□ -0.17
SNX1-211ENST00000560829 RHPN2Q8IUC4 686 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 SECISBP2LQ93073 1101 aaKnown RBP13.98□□□□□ -0.17
SNX1-211ENST00000560829 POP1Q99575 1024 aaKnown RBP13.98□□□□□ -0.17
SNX1-211ENST00000560829 ACO2Q99798 780 aaKnown RBP13.98□□□□□ -0.17
SNX1-211ENST00000560829 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 MSTO1Q9BUK6 570 aa13.98□□□□□ -0.17
SNX1-211ENST00000560829 ACKR2O00590 384 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 CLDN3O15551 220 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 FAM189A1O60320 539 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 ZC3H11AO75152 810 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX1-211ENST00000560829 PROZP22891 400 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 MCL1Q07820 350 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 CRHR2Q13324 411 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 KIF22Q14807 665 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 ARHGEF19Q8IW93 802 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 RNF10Q8N5U6 811 aaKnown RBP13.97□□□□□ -0.17
SNX1-211ENST00000560829 OLIG1Q8TAK6 271 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 APBA2Q99767 749 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 PTPRHQ9HD43 1115 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
SNX1-211ENST00000560829 RAB20Q9NX57 234 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 CA12O43570 354 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 LRRN2O75325 713 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 DLATP10515 647 aaKnown RBP13.97□□□□□ -0.17
SNX1-211ENST00000560829 ACOT2P49753 483 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 GRM1Q13255 1194 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 NAB2Q15742 525 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 ZACNQ401N2 412 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 SMC1BQ8NDV3 1235 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 TAS1R2Q8TE23 839 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 FNBP1Q96RU3 617 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX1-211ENST00000560829 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
SNX1-211ENST00000560829 RBAKQ9NYW8 714 aaPredicted RBP13.97□□□□□ -0.17
SNX1-211ENST00000560829 ANKFY1Q9P2R3 1169 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
SNX1-211ENST00000560829 CNTNAP2Q9UHC6 1331 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 BTNL10A8MVZ5 291 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 FOXN3O00409 490 aaPredicted RBP13.96□□□□□ -0.17
SNX1-211ENST00000560829 KIF3CO14782 793 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 C4BPAP04003 597 aaKnown RBP13.96□□□□□ -0.17
SNX1-211ENST00000560829 PNMA6AP0CW24 399 aaPredicted RBP13.96□□□□□ -0.17
SNX1-211ENST00000560829 TMOD1P28289 359 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 IGBP1P78318 339 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 AMPD2Q01433 879 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 FAM187BQ17R55 369 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 BRSK2Q8IWQ3 736 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 SLC30A5Q8TAD4 765 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 HELQQ8TDG4 1101 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 ZNF516Q92618 1163 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 NLRP4Q96MN2 994 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 CDC23Q9UJX2 597 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 Q9Y3F1 56 aa13.96□□□□□ -0.17
SNX1-211ENST00000560829 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms