RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 CD302Q8IX05 232 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 LRRC43Q8N309 656 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 SPATA20Q8TB22 786 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 ZNF689Q96CS4 500 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 RSAD1Q9HA92 442 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 KIAA1586Q9HCI6 787 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 IPPQ9Y573 584 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 STYXL1Q9Y6J8 313 aa13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-215ENST00000560207 B4GALT5O43286 388 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 NPTXRO95502 500 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 RB1P06400 928 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 GRM5P41594 1212 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 MATR3P43243 847 aaKnown RBP eCLIP13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
RABGGTA-215ENST00000560207 A0A0B4J269 797 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 OGTO15294 1046 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 CLTAP09496 248 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 DNAJB2P25686 324 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 NOMO2Q5JPE7 1267 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 GUF1Q8N442 669 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 TIFAQ96CG3 184 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 ACAP3Q96P50 834 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 CDT1Q9H211 546 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
RABGGTA-215ENST00000560207 PDXKO00764 312 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 LAG3P18627 525 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 PPM1AP35813 382 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 PNOCQ13519 176 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 SURF1Q15526 300 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 FOXR2Q6PJQ5 311 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 C12orf56Q8IXR9 622 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 GRAMD1CQ8IYS0 662 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 CLP1Q92989 425 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 FAM193BQ96PV7 902 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 SLC39A2Q9NP94 309 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 PCDHB12Q9Y5F1 795 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
RABGGTA-215ENST00000560207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 TBKBP1A7MCY6 615 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ABLIM1O14639 778 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 CALUO43852 315 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 OFD1O75665 1012 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 MYBP10242 640 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 PAX3P23760 479 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 MCM4P33991 863 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 GRIK3Q13003 919 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 STK4Q13043 487 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 NFIL3Q16649 462 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 FAM117BQ6P1L5 589 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 USP37Q86T82 979 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 P2RX5Q93086 422 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 TMEM175Q9BSA9 504 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 CLSTN2Q9H4D0 955 aa13.15□□□□□ -0.3
RABGGTA-215ENST00000560207 ASB7Q9H672 318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms