RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 WASF1Q92558 559 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 ZFP42Q96MM3 310 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 GAD1Q99259 594 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 HSD17B14Q9BPX1 270 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 EIF2AK1Q9BQI3 630 aaKnown RBP14.57□□□□□ -0.08
TPM1-220ENST00000559556 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 MFSD1Q9H3U5 465 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
TPM1-220ENST00000559556 HES2Q9Y543 173 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 INO80B-WBP1J3KQ70 363 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 TEX28O15482 410 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 DTNBO60941 627 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 N4BP1O75113 896 aaKnown RBP14.56□□□□□ -0.08
TPM1-220ENST00000559556 DGAT1O75907 488 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 GLUD1P00367 558 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 C1RP00736 705 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
TPM1-220ENST00000559556 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
TPM1-220ENST00000559556 ARL2P36404 184 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 OR1G1P47890 313 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 SCNN1GP51170 649 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 DSG1Q02413 1049 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 ELMSAN1Q6PJG2 1045 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 TAS1R1Q7RTX1 841 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 NXF3Q9H4D5 531 aaKnown RBP14.56□□□□□ -0.08
TPM1-220ENST00000559556 KCNK12Q9HB15 430 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 RXFP1Q9HBX9 757 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 CHST7Q9NS84 486 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 IGSF9Q9P2J2 1179 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 PCDHA12Q9UN75 941 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 CLUHO75153 1309 aa14.56□□□□□ -0.08
TPM1-220ENST00000559556 SPTBN2O15020 2390 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 F8W810 466 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 AOC1P19801 751 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 GLRA2P23416 452 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 RARRES1P49788 294 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 ANAPC15P60006 121 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
TPM1-220ENST00000559556 ANKRD1Q15327 319 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 SLC27A1Q6PCB7 646 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 GPR65Q8IYL9 337 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 HACE1Q8IYU2 909 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 TRIM6Q9C030 488 aaPredicted RBP14.55□□□□□ -0.08
TPM1-220ENST00000559556 TTC12Q9H892 705 aaPredicted RBP14.55□□□□□ -0.08
TPM1-220ENST00000559556 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 WDR6Q9NNW5 1121 aaKnown RBP14.55□□□□□ -0.08
TPM1-220ENST00000559556 MIOSQ9NXC5 875 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 COL4A2P08572 1712 aa14.55□□□□□ -0.08
TPM1-220ENST00000559556 NUP210Q8TEM1 1887 aaPredicted RBP14.55□□□□□ -0.08
TPM1-220ENST00000559556 CCDC195A0A1B0GUA6 201 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 PRR23AA6NEV1 266 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 NEMFO60524 1076 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 NR1I2O75469 434 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 NPR3P17342 541 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 GRIK3Q13003 919 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 CALCRLQ16602 461 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 FUT10Q6P4F1 479 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 GSTCDQ8NEC7 633 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 GTF3C6Q969F1 213 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
TPM1-220ENST00000559556 APOL6Q9BWW8 343 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.54□□□□□ -0.08
TPM1-220ENST00000559556 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 ADAM28Q9UKQ2 775 aa14.54□□□□□ -0.08
TPM1-220ENST00000559556 GPR179Q6PRD1 2367 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 A0A1B0GUA9 196 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 WNT7AO00755 349 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 B4GALT5O43286 388 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 RFPL2O75678 378 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 LARGE1O95461 756 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 USP41Q3LFD5 358 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 ASCL5Q7RTU5 278 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 FLCNQ8NFG4 579 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 SMG7Q92540 1137 aaKnown RBP14.53□□□□□ -0.08
TPM1-220ENST00000559556 STAMQ92783 540 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 ZNF707Q96C28 371 aaPredicted RBP14.53□□□□□ -0.08
TPM1-220ENST00000559556 PRIMPOLQ96LW4 560 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 MTMR9Q96QG7 549 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 COLEC11Q9BWP8 271 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 GPR62Q9BZJ7 368 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 POLR3FQ9H1D9 316 aaPredicted RBP14.53□□□□□ -0.08
TPM1-220ENST00000559556 PLEKHA4Q9H4M7 779 aa14.53□□□□□ -0.08
TPM1-220ENST00000559556 OBSL1O75147 1896 aa14.52□□□□□ -0.08
TPM1-220ENST00000559556 COL4A3Q01955 1670 aa14.52□□□□□ -0.08
TPM1-220ENST00000559556 POTEMA6NI47 508 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 NARSO43776 548 aaKnown RBP14.52□□□□□ -0.09
TPM1-220ENST00000559556 NPTXRO95502 500 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM1-220ENST00000559556 AKAP5P24588 427 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 CREMQ03060 361 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 ME3Q16798 604 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms