RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 DSC1Q08554 894 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 PTPN14Q15678 1187 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
TPM1-218ENST00000559281 RPS6KC1Q96S38 1066 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.61■□□□□ 0.73
TPM1-218ENST00000559281 MIOSQ9NXC5 875 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 RAPGEFL1Q9UHV5 662 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 SMC3Q9UQE7 1217 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 NR2E1Q9Y466 385 aa19.61■□□□□ 0.73
TPM1-218ENST00000559281 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.61■□□□□ 0.73
TPM1-218ENST00000559281 SSBP05455 408 aaKnown RBP eCLIP19.6■□□□□ 0.73
TPM1-218ENST00000559281 PRKCBP05771 671 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 URODP06132 367 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 ECM1Q16610 540 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 ATAT1Q5SQI0 421 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 KIAA1841Q6NSI8 718 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
TPM1-218ENST00000559281 CABP7Q86V35 215 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 EDAQ92838 391 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 KLHL5Q96PQ7 755 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 VN1R3Q9BXE9 311 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 DPP7Q9UHL4 492 aa19.6■□□□□ 0.73
TPM1-218ENST00000559281 SPDYE4A6NLX3 237 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 LIG1P18858 919 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 GRIK3Q13003 919 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 ELMSAN1Q6PJG2 1045 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 HERC2P3Q9BVR0 1158 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
TPM1-218ENST00000559281 K7ERI5 159 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 LILRB3O75022 631 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 CNPP09543 421 aaKnown RBP19.58■□□□□ 0.72
TPM1-218ENST00000559281 EPCAMP16422 314 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 RARS2Q5T160 578 aaKnown RBP19.58■□□□□ 0.72
TPM1-218ENST00000559281 GSTCDQ8NEC7 633 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 FBXL18Q96ME1 805 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 PDZD7Q9H5P4 517 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 KCNG1Q9UIX4 513 aa19.58■□□□□ 0.72
TPM1-218ENST00000559281 PHLPP2Q6ZVD8 1323 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 C2CD2LO14523 706 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 ADH1AP07327 375 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 GLUD2P49448 558 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 LARP1BQ659C4 914 aaKnown RBP19.57■□□□□ 0.72
TPM1-218ENST00000559281 FAM122AQ96E09 287 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 MFSD14AQ96MC6 490 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 CCDC113Q9H0I3 377 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
TPM1-218ENST00000559281 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 E9PMD0 336 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 TADA2AO75478 443 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 THP07101 528 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 CDC25AP30304 524 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 CLCN4P51793 760 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 ZXDAP98168 799 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 ATP2C1P98194 919 aaPredicted RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 DMP1Q13316 513 aaPredicted RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 TUSC3Q13454 348 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 ZRSR1Q15695 479 aaKnown RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 IL17AQ16552 155 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 ARL6IP4Q66PJ3 421 aaKnown RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 TAS1R1Q7RTX1 841 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 GPR65Q8IYL9 337 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 C12orf76Q8N812 135 aaPredicted RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 NT5C3AQ9H0P0 336 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 SFXN1Q9H9B4 322 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 C17orf75Q9HAS0 396 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 POLD4Q9HCU8 107 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 ADAM28Q9UKQ2 775 aa19.56■□□□□ 0.72
TPM1-218ENST00000559281 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
TPM1-218ENST00000559281 TTLL13PA6NNM8 815 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 PEX3P56589 373 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 DSG1Q02413 1049 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 USP41Q3LFD5 358 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 ATF7IP2Q5U623 682 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 KIAA0319Q5VV43 1072 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 TRIM67Q6ZTA4 783 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 ZBTB33Q86T24 672 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 RNF168Q8IYW5 571 aaPredicted RBP19.55■□□□□ 0.72
TPM1-218ENST00000559281 CDK5RAP3Q96JB5 506 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 POMKQ9H5K3 350 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 TMEM134Q9H6X4 195 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 RXFP1Q9HBX9 757 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.55■□□□□ 0.72
TPM1-218ENST00000559281 CHST7Q9NS84 486 aa19.55■□□□□ 0.72
TPM1-218ENST00000559281 ARID2Q68CP9 1835 aa19.54■□□□□ 0.72
TPM1-218ENST00000559281 HIP1RO75146 1068 aa19.54■□□□□ 0.72
TPM1-218ENST00000559281 EFEMP2O95967 443 aa19.54■□□□□ 0.72
TPM1-218ENST00000559281 C1RP00736 705 aa19.54■□□□□ 0.72
TPM1-218ENST00000559281 PLA2G5P39877 138 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms