RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 RFXAPO00287 272 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 FGF18O76093 207 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 MCF2P10911 925 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 GRIK3Q13003 919 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 SHC4Q6S5L8 630 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 MPZL3Q6UWV2 235 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 MICALL1Q8N3F8 863 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 NXF3Q9H4D5 531 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 NSUN3Q9H649 340 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 EXOC7Q9UPT5 735 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 ZDHHC9Q9Y397 364 aa17.32■□□□□ 0.36
RABGGTA-205ENST00000558534 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 CLDN3O15551 220 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 ZC3H11AO75152 810 aaKnown RBP eCLIP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 ALDH2P05091 517 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 MYL1P05976 194 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 CMA1P23946 247 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 LIG4P49917 911 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 AAK1Q2M2I8 961 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 NT5DC1Q5TFE4 455 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 DYMQ7RTS9 669 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 DHX58Q96C10 678 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 POLD4Q9HCU8 107 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 TLR9Q9NR96 1032 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 OLFML3Q9NRN5 406 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 PCDHB13Q9Y5F0 798 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
RABGGTA-205ENST00000558534 NPHP3-ACAD11A0A0J9YXS1 232 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 ITGB1P05556 798 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 IDEP14735 1019 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 MLH1P40692 756 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 BCAR1P56945 870 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 GTF2BQ00403 316 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 SLFN12LQ6IEE8 588 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 MRPL44Q9H9J2 332 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 KBTBD4Q9NVX7 518 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 KCNH3Q9ULD8 1083 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 SSX2IPQ9Y2D8 614 aa17.3■□□□□ 0.36
RABGGTA-205ENST00000558534 A0A1W2PQ27 194 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 A0A1W2PQ64 194 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 A0A1W2PQD8 194 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 MYMKA6NI61 221 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 PIGRP01833 764 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 SRGAP2BP0DMP2 458 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 GRM5P41594 1212 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 HSP90AA2PQ14568 343 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 E2F4Q16254 413 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 HERC4Q5GLZ8 1057 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 LRRC55Q6ZSA7 311 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 MAP4K3Q8IVH8 894 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 SLC39A11Q8N1S5 342 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 MICAL1Q8TDZ2 1067 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 PPM1EQ8WY54 764 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 TSPAN18Q96SJ8 248 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 GAD1Q99259 594 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 TARS2Q9BW92 718 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 SLC38A7Q9NVC3 462 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
RABGGTA-205ENST00000558534 FRMD3A2A2Y4 597 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 GRM6O15303 877 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 RECQL4O94761 1208 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 POMCP01189 267 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 THP07101 528 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 PROZP22891 400 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 POSTNQ15063 836 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 CCDC85BQ15834 202 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 TMEM87AQ8NBN3 555 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 LRRC15Q8TF66 581 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 ACAP3Q96P50 834 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 CDT1Q9H211 546 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 NRDE2Q9H7Z3 1164 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 TMEM206Q9H813 350 aa17.28■□□□□ 0.36
RABGGTA-205ENST00000558534 PTPRHQ9HD43 1115 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms