RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 FRMD3A2A2Y4 597 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 PHF2O75151 1096 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 CAND2O75155 1236 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 ANXA13P27216 316 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 SLC47A2Q86VL8 602 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 KLHL29Q96CT2 875 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 HVCN1Q96D96 273 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 AGPSO00116 658 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 STAM2O75886 525 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 POLR3FQ9H1D9 316 aaPredicted RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 TMBIM4Q9HC24 238 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 SAYSD1Q9NPB0 183 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 TMX2Q9Y320 296 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 H0YCG3 227 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 CALCAP01258 141 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 BRAFP15056 766 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 POLD1P28340 1107 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 ZWILCHQ9H900 591 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 PFASO15067 1338 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 MYH10P35580 1976 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 HMGCS2P54868 508 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 KYNUQ16719 465 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 COBLL1Q53SF7 1204 aa16.53■□□□□ 0.24
AP4E1-202ENST00000558439 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
AP4E1-202ENST00000558439 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 FAM107AO95990 144 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 CLNS1AP54105 237 aaKnown RBP16.52■□□□□ 0.24
AP4E1-202ENST00000558439 ATP11AP98196 1134 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 BYSLQ13895 437 aaKnown RBP16.52■□□□□ 0.24
AP4E1-202ENST00000558439 SEZ6Q53EL9 994 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.52■□□□□ 0.24
AP4E1-202ENST00000558439 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.52■□□□□ 0.24
AP4E1-202ENST00000558439 FAM84AQ96KN4 292 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 EFCC1Q9HA90 598 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 INTUQ9ULD6 942 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 SLC26A4O43511 780 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 MAPK7Q13164 816 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 BSPRYQ5W0U4 402 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 KRT35Q92764 455 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 SEC16BQ96JE7 1060 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 ATP6V0A4Q9HBG4 840 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 MYO3BQ8WXR4 1341 aa16.52■□□□□ 0.24
AP4E1-202ENST00000558439 RFX1P22670 979 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 TKFCQ3LXA3 575 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 TAS1R2Q8TE23 839 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 MKL1Q969V6 931 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 TRIM11Q96F44 468 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 NR3C2P08235 984 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.23
AP4E1-202ENST00000558439 ARMC9Q7Z3E5 817 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 GPD1LQ8N335 351 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.23
AP4E1-202ENST00000558439 NLRP4Q96MN2 994 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 IDI2Q9BXS1 227 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.23
AP4E1-202ENST00000558439 GNA15P30679 374 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 CDAN1Q8IWY9 1227 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 RSRC1Q96IZ7 334 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 XPO6Q96QU8 1125 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 LRP6O75581 1613 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 RASA4BC9J798 803 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 RASA4O43374 803 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 CA4P22748 312 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 MAN1A1P33908 653 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 HSPA9P38646 679 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 ZNF844Q08AG5 666 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 PHLDB3Q6NSJ2 640 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 EPS8L3Q8TE67 593 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 ZSWIM1Q9BR11 485 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 AGO2Q9UKV8 859 aaKnown RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 TNNC2P02585 160 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 PPP3CAQ08209 521 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 BBS9Q3SYG4 887 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 FYB2Q5VWT5 728 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms