RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 PPP2R5DQ14738 602 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 USP41Q3LFD5 358 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 XKR3Q5GH77 459 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 PPM1LQ5SGD2 360 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 LRCH2Q5VUJ6 765 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 APOA5Q6Q788 366 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 MRPL10Q7Z7H8 261 aaKnown RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 COLGALT2Q8IYK4 626 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 CNNM3Q8NE01 707 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 EXOC6Q8TAG9 804 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 CCDC12Q8WUD4 166 aaPredicted RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 NELL2Q99435 816 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 JPH2Q9BR39 696 aaPredicted RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 DDX23Q9BUQ8 820 aaKnown RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 APOL6Q9BWW8 343 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 UNC45AQ9H3U1 944 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 MRPS17Q9Y2R5 130 aaKnown RBP9.12□□□□□ -0.95
LRRC49-208ENST00000558204 COL4A3Q01955 1670 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 DOCK8Q8NF50 2099 aa9.12□□□□□ -0.95
LRRC49-208ENST00000558204 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 PATJQ8NI35 1801 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 F8W810 466 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 MSH4O15457 936 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 CCL16O15467 120 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 XYLBO75191 536 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 MAFO75444 373 aaPredicted RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 ERLIN2O94905 339 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 NCLP19338 710 aaKnown RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 TGM1P22735 817 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 TARSP26639 723 aaKnown RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 MLH1P40692 756 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 SCNN1GP51170 649 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 NRLP54845 237 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 AAMPQ13685 434 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 IL31Q6EBC2 164 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 LAIR1Q6GTX8 287 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 FUT10Q6P4F1 479 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 ZNF852Q6ZMS4 543 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 FGF13Q92913 245 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 GJA10Q969M2 543 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 CCDC136Q96JN2 1154 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 GAD1Q99259 594 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 FAM126AQ9BYI3 521 aaPredicted RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 FNIP2Q9P278 1114 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 NDRG2Q9UN36 371 aaKnown RBP9.11□□□□□ -0.95
LRRC49-208ENST00000558204 COL4A3BPQ9Y5P4 624 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 ACACBO00763 2458 aa9.11□□□□□ -0.95
LRRC49-208ENST00000558204 CACNA1GO43497 2377 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 IGKV6-21A0A0C4DH24 114 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 ARL5CA6NH57 179 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 SLC27A2O14975 620 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 TADA2AO75478 443 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 C1RP00736 705 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 C8AP07357 584 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 GNA11P29992 359 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 ADCY1Q08828 1119 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 MTAPQ13126 283 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 PFKFB3Q16875 520 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 PLA2G4FQ68DD2 849 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 PRSS55Q6UWB4 352 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 CEP57Q86XR8 500 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 HACE1Q8IYU2 909 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 RNF168Q8IYW5 571 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 CELF5Q8N6W0 485 aaKnown RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 RDM1Q8NG50 284 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 ITFG1Q8TB96 612 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 SLC7A3Q8WY07 619 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 DDX1Q92499 740 aaKnown RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 RIT2Q99578 217 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 TRIM6Q9C030 488 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 IFT122Q9HBG6 1241 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 PRMT8Q9NR22 394 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-208ENST00000558204 CHST7Q9NS84 486 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 SEMA4GQ9NTN9 838 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 IPPQ9Y573 584 aa9.1□□□□□ -0.95
LRRC49-208ENST00000558204 SPTBN2O15020 2390 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 MTCL1Q9Y4B5 1905 aaKnown RBP9.09□□□□□ -0.95
LRRC49-208ENST00000558204 KLF18A0A0U1RQI7 1052 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 ESYT2A0FGR8 921 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 RETP07949 1114 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 HNRNPA1P09651 372 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRRC49-208ENST00000558204 CIITAP33076 1130 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 RPS9P46781 194 aaKnown RBP9.09□□□□□ -0.95
LRRC49-208ENST00000558204 FGD1P98174 961 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 AKAP17AQ02040 695 aaKnown RBP9.09□□□□□ -0.95
LRRC49-208ENST00000558204 FUT2Q10981 343 aa9.09□□□□□ -0.95
LRRC49-208ENST00000558204 SIM2Q14190 667 aaPredicted RBP9.09□□□□□ -0.95
LRRC49-208ENST00000558204 UBXN11Q5T124 520 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms