RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 BRAPQ7Z569 592 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 DDX53Q86TM3 631 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 MRPL43Q8N983 215 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 GSTCDQ8NEC7 633 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 KIFAP3Q92845 792 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM169Q96HH4 297 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 IFT74Q96LB3 600 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 ZFP42Q96MM3 310 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 KIFC3Q9BVG8 833 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 RUSC1Q9BVN2 902 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 VN1R3Q9BXE9 311 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 GBP3Q9H0R5 595 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 NXF3Q9H4D5 531 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 PDZD7Q9H5P4 517 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 ENTPD7Q9NQZ7 604 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 CD207Q9UJ71 328 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 BARX2Q9UMQ3 279 aaPredicted RBP9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 USP20Q9Y2K6 914 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 GIT1Q9Y2X7 761 aa9.7□□□□□ -0.86
SNRPA1-206ENST00000558059 VPS37CA5D8V6 355 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 C2orf71A6NGG8 1288 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 N4BP3O15049 544 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 HIP1RO75146 1068 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 CXCL14O95715 111 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 ALDH2P05091 517 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 PRKCBP05771 671 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 CTSAP10619 480 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 PDCP20941 246 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SYT1P21579 422 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 AKAP5P24588 427 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 MLH1P40692 756 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 NPTX2P47972 431 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SCNN1GP51170 649 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 EFNA5P52803 228 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 GRIN1Q05586 938 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 DSC1Q08554 894 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 COASYQ13057 564 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SMAD4Q13485 552 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 PRPF4BQ13523 1007 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SF3A1Q15459 793 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 ZRSR1Q15695 479 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 MAPK6Q16659 721 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM119Q4V9L6 283 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 NT5DC1Q5TFE4 455 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 EEF1DP3Q658K8 133 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 VPS52Q8N1B4 723 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 DEPTORQ8TB45 409 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 LRRC15Q8TF66 581 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.867e-7■■■□□ 16
SNRPA1-206ENST00000558059 FAM193BQ96PV7 902 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 PLIN2Q99541 437 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM175Q9BSA9 504 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 APOL6Q9BWW8 343 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 TRIM6Q9C030 488 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 ZBP1Q9H171 429 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 FAM50BQ9Y247 325 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 FAN1Q9Y2M0 1017 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 GTF3C3Q9Y5Q9 886 aa9.69□□□□□ -0.86
SNRPA1-206ENST00000558059 CITO14578 2027 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 NRP1O14786 923 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 SLC26A4O43511 780 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 CLASP2O75122 1294 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 EFEMP2O95967 443 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 BMP15O95972 392 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 PLA2G4BP0C869 781 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 LIG1P18858 919 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 GUCY2CP25092 1073 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 SLC12A3P55017 1021 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 PEX3P56589 373 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 ZP2Q05996 745 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 RESTQ13127 1097 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 PTPAQ15257 358 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 CABP7Q86V35 215 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 HACE1Q8IYU2 909 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 GJD3Q8N144 294 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 SYT2Q8N9I0 419 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 AUTS2Q8WXX7 1259 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 AK8Q96MA6 479 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 NT5C3AQ9H0P0 336 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 MARCH5Q9NX47 278 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 KLK14Q9P0G3 267 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 ARHGAP28Q9P2N2 729 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 PRKAG3Q9UGI9 489 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 PARP2Q9UGN5 583 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 IRAK3Q9Y616 596 aa9.68□□□□□ -0.86
SNRPA1-206ENST00000558059 MTCL1Q9Y4B5 1905 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 CCDC169A6NNP5 214 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 F8W810 466 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 K7ERI5 159 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 LILRB3O75022 631 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms