RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 A0A087WWV3 80 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 B4GALT5O43286 388 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 NR1I2O75469 434 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 LARGE1O95461 756 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 GLUD1P00367 558 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 NPR3P17342 541 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 AKAP5P24588 427 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 TXKP42681 527 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 NSUN7Q8NE18 718 aaKnown RBP17.71■□□□□ 0.43
SCFD1-224ENST00000557713 PIGOQ8TEQ8 1089 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 HDAC7Q8WUI4 952 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 GTF3C6Q969F1 213 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 APOL6Q9BWW8 343 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 GPR62Q9BZJ7 368 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 NXF3Q9H4D5 531 aaKnown RBP17.71■□□□□ 0.43
SCFD1-224ENST00000557713 WDR6Q9NNW5 1121 aaKnown RBP17.71■□□□□ 0.43
SCFD1-224ENST00000557713 IGSF9Q9P2J2 1179 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 DUSP12Q9UNI6 340 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
SCFD1-224ENST00000557713 PLXNA3P51805 1871 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 NEMFO60524 1076 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 NBL1P41271 181 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 CWF19L1Q69YN2 538 aaKnown RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 SLC27A1Q6PCB7 646 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 CDR2LQ86X02 465 aaPredicted RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 GPR65Q8IYL9 337 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 ZNF707Q96C28 371 aaPredicted RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 B3GALT6Q96L58 329 aa17.7■□□□□ 0.42
SCFD1-224ENST00000557713 TRIM6Q9C030 488 aaPredicted RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 POLR3FQ9H1D9 316 aaPredicted RBP17.7■□□□□ 0.42
SCFD1-224ENST00000557713 MYO15AQ9UKN7 3530 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 ZFHX2Q9C0A1 2572 aaPredicted RBP17.69■□□□□ 0.42
SCFD1-224ENST00000557713 PI15O43692 258 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 RFPL2O75678 378 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 NPTXRO95502 500 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 SPATA31D3P0C874 917 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 MYBP10242 640 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 AOC1P19801 751 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 USP41Q3LFD5 358 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 LILRA6Q6PI73 481 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 ELMSAN1Q6PJG2 1045 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 SPATA31D4Q6ZUB0 917 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 PALB2Q86YC2 1186 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 FLCNQ8NFG4 579 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 PLEKHA4Q9H4M7 779 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 FNIP2Q9P278 1114 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 CACNA1HO95180 2353 aa17.69■□□□□ 0.42
SCFD1-224ENST00000557713 ZMYM2Q9UBW7 1377 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 TGM5O43548 720 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 GRIK3Q13003 919 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 FUT10Q6P4F1 479 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 ASCL5Q7RTU5 278 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 CATSPER3Q86XQ3 398 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 RSAD2Q8WXG1 361 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 CCDC43Q96MW1 224 aaKnown RBP17.68■□□□□ 0.42
SCFD1-224ENST00000557713 NT5C3AQ9H0P0 336 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 TMEM60Q9H2L4 133 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 FZD8Q9H461 694 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.68■□□□□ 0.42
SCFD1-224ENST00000557713 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 EPS15L1Q9UBC2 864 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 CLUHO75153 1309 aa17.68■□□□□ 0.42
SCFD1-224ENST00000557713 TDRD15B5MCY1 1934 aaKnown RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 POTEMA6NI47 508 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 NARSO43776 548 aaKnown RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 JAK2O60674 1132 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 USO1O60763 962 aaKnown RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 GBP2P32456 591 aaPredicted RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 MAEAQ7L5Y9 396 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 SLC44A3Q8N4M1 653 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 SMG7Q92540 1137 aaKnown RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 STAMQ92783 540 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 PRIMPOLQ96LW4 560 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 MYADMQ96S97 322 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 TUFT1Q9NNX1 390 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 PRMT7Q9NVM4 692 aaPredicted RBP17.67■□□□□ 0.42
SCFD1-224ENST00000557713 PARP2Q9UGN5 583 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 DMDP11532 3685 aa17.67■□□□□ 0.42
SCFD1-224ENST00000557713 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 MED24O75448 989 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 TADA2AO75478 443 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 FAM187BQ17R55 369 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 CDCA2Q69YH5 1023 aaPredicted RBP17.66■□□□□ 0.42
SCFD1-224ENST00000557713 POTEGQ6S5H5 508 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 SIX5Q8N196 739 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 MCPH1Q8NEM0 835 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
SCFD1-224ENST00000557713 NXPE3Q969Y0 559 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 RTP3Q9BQQ7 232 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 PRKD2Q9BZL6 878 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 ZDHHC7Q9NXF8 308 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms