RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	LIG3	P49916	1009 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	OAZ1	P54368	228 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	ERVFC1	P60507	584 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	HTRA4	P83105	476 aa	Predicted RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	PURA	Q00577	322 aa	Known RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	CNTN2	Q02246	1040 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SIGLEC14	Q08ET2	396 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	CBX2	Q14781	532 aa	Predicted RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	TSNAXIP1	Q2TAA8	658 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	GAB4	Q2WGN9	574 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	DUSP28	Q4G0W2	176 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	EPC2	Q52LR7	807 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	TTC39A	Q5SRH9	613 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	OXR1	Q8N573	874 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	MIGA1	Q8NAN2	632 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	DNAJB8	Q8NHS0	232 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	AFAP1L1	Q8TED9	768 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SSH1	Q8WYL5	1049 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	KCNN1	Q92952	543 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076		Q96M66	194 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SAMD11	Q96NU1	681 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SLF1	Q9BQI6	1058 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	RIOK1	Q9BRS2	568 aa	Known RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	MTG1	Q9BT17	334 aa	Predicted RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	KRTAP4-11	Q9BYQ6	195 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	GPR62	Q9BZJ7	368 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SLC6A17	Q9H1V8	727 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	PIH1D3	Q9NQM4	214 aa	Known RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	TLR9	Q9NR96	1032 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	MCM9	Q9NXL9	1143 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	DUSP13	Q9UII6	198 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	KCNH3	Q9ULD8	1083 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	CEP131	Q9UPN4	1083 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	SMG5	Q9UPR3	1016 aa	Known RBP	5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	CHD6	Q8TD26	2715 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	ATAD5	Q96QE3	1844 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	DNAH14	Q0VDD8	3507 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	LOC730098	B7Z3J9	87 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076		B8ZZF3	427 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	PRPF40A	O75400	957 aa	Known RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	IDH1	O75874	414 aa	Known RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	AKR1B1	P15121	316 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CPT1A	P50416	773 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	LINC00310	P59036	64 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	DEFB103A	P81534	67 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	RPL6	Q02878	288 aa	Known RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	KCNA1	Q09470	495 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	SMAD4	Q13485	552 aa	Known RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	BRDT	Q58F21	947 aa	Predicted RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	FAM83B	Q5T0W9	1011 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CNKSR3	Q6P9H4	555 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	EP400NL	Q6ZTU2	488 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	IRF2BP1	Q8IU81	584 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CPXCR1	Q8N123	301 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CAGE1	Q8TC20	777 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	MORC4	Q8TE76	937 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	DHX38	Q92620	1227 aa	Known RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	NKD2	Q969F2	451 aa	Predicted RBP	5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CRBN	Q96SW2	442 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	C17orf80	Q9BSJ5	609 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	SLC38A10	Q9HBR0	1119 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	PDGFC	Q9NRA1	345 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	CLDND1	Q9NY35	253 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	AK5	Q9Y6K8	562 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	BAHCC1	Q9P281	2608 aa		5.63	□□□□□ -1.51
SCFD1-223	ENST00000557076	TET1	Q8NFU7	2136 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	SPTBN2	O15020	2390 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	RBM47	A0AV96	593 aa	Known RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	MED19	A0JLT2	244 aa	Predicted RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	FITM1	A5D6W6	292 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076		F5H6K3	240 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	NUAK1	O60285	661 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	NBN	O60934	754 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	RB1	P06400	928 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	GNAI3	P08754	354 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	ZGLP1	P0C6A0	271 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	VCP	P55072	806 aa	Known RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	EGR3	Q06889	387 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	KLRC3	Q07444	240 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	DLX2	Q07687	328 aa	Predicted RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	RBL2	Q08999	1139 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	ADAM15	Q13444	863 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	GPM6B	Q13491	265 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	ALDH1L2	Q3SY69	923 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	TNNI3K	Q59H18	835 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	TMEM63B	Q5T3F8	832 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	TMEM192	Q8IY95	271 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	ADSSL1	Q8N142	457 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	CYB5D2	Q8WUJ1	264 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	ACSF2	Q96CM8	615 aa	Predicted RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	DYNLL2	Q96FJ2	89 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	WDR11	Q9BZH6	1224 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	RNF32	Q9H0A6	362 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	KCNK12	Q9HB15	430 aa		5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	RAVER2	Q9HCJ3	691 aa	Known RBP	5.62	□□□□□ -1.51
SCFD1-223	ENST00000557076	VTA1	Q9NP79	307 aa		5.62	□□□□□ -1.51

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