RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ANKEF1Q9NU02 776 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 DPP7Q9UHL4 492 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 GIT1Q9Y2X7 761 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 DOCK6Q96HP0 2047 aa20.34■□□□□ 0.85
VIPAS39-209ENST00000556909 CLUHO75153 1309 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 B4GALT5O43286 388 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 RFPL2O75678 378 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 MYBP10242 640 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 NPR3P17342 541 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 AOC1P19801 751 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 GLRA2P23416 452 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 RARRES1P49788 294 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 CALCRLQ16602 461 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 ELMSAN1Q6PJG2 1045 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 GSTCDQ8NEC7 633 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 B3GALT6Q96L58 329 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 BRMS1Q9HCU9 246 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 WDR6Q9NNW5 1121 aaKnown RBP20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 CHST7Q9NS84 486 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 IGSF9Q9P2J2 1179 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 PCDHA12Q9UN75 941 aa20.33■□□□□ 0.85
VIPAS39-209ENST00000556909 PRR23AA6NEV1 266 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 WNT7AO00755 349 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 NARSO43776 548 aaKnown RBP20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 NR1I2O75469 434 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 AKAP5P24588 427 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 CYP26C1Q6V0L0 522 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 HACE1Q8IYU2 909 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 COLEC11Q9BWP8 271 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 TTC12Q9H892 705 aaPredicted RBP20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 ZMYM2Q9UBW7 1377 aa20.32■□□□□ 0.84
VIPAS39-209ENST00000556909 PI15O43692 258 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 NEMFO60524 1076 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 PAPLNO95428 1278 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 NPTXRO95502 500 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 GBP2P32456 591 aaPredicted RBP20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 ANKRD1Q15327 319 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 FUT10Q6P4F1 479 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 SLC27A1Q6PCB7 646 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 CDR2LQ86X02 465 aaPredicted RBP20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 SIX5Q8N196 739 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 RSAD2Q8WXG1 361 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 SMG7Q92540 1137 aaKnown RBP20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 STAMQ92783 540 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 ZNF707Q96C28 371 aaPredicted RBP20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 GPR62Q9BZJ7 368 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 POLR3FQ9H1D9 316 aaPredicted RBP20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 VWA8A3KMH1 1905 aa20.31■□□□□ 0.84
VIPAS39-209ENST00000556909 MYH15Q9Y2K3 1946 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 LARGE1O95461 756 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 SPATA31D3P0C874 917 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 GRIK3Q13003 919 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 SPATA31D4Q6ZUB0 917 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 FRMD5Q7Z6J6 570 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 PALB2Q86YC2 1186 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 CCDC105Q8IYK2 499 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 PIGOQ8TEQ8 1089 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 HDAC7Q8WUI4 952 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 GTF3C6Q969F1 213 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 SNX27Q96L92 541 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 MYADMQ96S97 322 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 KLK14Q9P0G3 267 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 EPS15L1Q9UBC2 864 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 ADAM28Q9UKQ2 775 aa20.3■□□□□ 0.84
VIPAS39-209ENST00000556909 GVINP1Q7Z2Y8 2422 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 A0A1B0GUA9 196 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 POTEMA6NI47 508 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 TGM5O43548 720 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 USO1O60763 962 aaKnown RBP20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 C1RP00736 705 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 TXKP42681 527 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 ANAPC15P60006 121 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 USP41Q3LFD5 358 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 NSUN7Q8NE18 718 aaKnown RBP20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 MTMR9Q96QG7 549 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 PLEKHA4Q9H4M7 779 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 GPRC5CQ9NQ84 441 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 FNIP2Q9P278 1114 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 CACNG4Q9UBN1 327 aa20.29■□□□□ 0.84
VIPAS39-209ENST00000556909 TRIP11Q15643 1979 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 A0A087WWV3 80 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 BTBD18B2RXH4 712 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 CFHP08603 1231 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 RPL17P18621 184 aaKnown RBP20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 ME3Q16798 604 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 GLYCTKQ8IVS8 523 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 DIS3L2Q8IYB7 885 aaKnown RBP20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 GPR65Q8IYL9 337 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 RIN2Q8WYP3 895 aaPredicted RBP20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 RTP3Q9BQQ7 232 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 NT5C3AQ9H0P0 336 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 ZDHHC7Q9NXF8 308 aa20.28■□□□□ 0.84
VIPAS39-209ENST00000556909 WDR87Q6ZQQ6 2873 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms