RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GPR62Q9BZJ7 368 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 SLKQ9H2G2 1235 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 PLEKHA4Q9H4M7 779 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 UBN1Q9NPG3 1134 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 SLC2A4RGQ9NR83 387 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 CHST7Q9NS84 486 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 MIOSQ9NXC5 875 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 ZDHHC7Q9NXF8 308 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 VAV3Q9UKW4 847 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 FANCMQ8IYD8 2048 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 ACACBO00763 2458 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 M0R2N6 131 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 NR1I2O75469 434 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 RPS6KB1P23443 525 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 PDIA3P30101 505 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 RFC5P40937 340 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 GPC5P78333 572 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 NBR1Q14596 966 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 EMC2Q15006 297 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 INF2Q27J81 1249 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 FUT10Q6P4F1 479 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 MOXD1Q6UVY6 613 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 MAML2Q8IZL2 1156 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 FBXL16Q8N461 479 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 SUMF1Q8NBK3 374 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 RABGGTAQ92696 567 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 KCNB2Q92953 911 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 CPB2Q96IY4 423 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 COLEC11Q9BWP8 271 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 AGXT2Q9BYV1 514 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
HNRNPC-227ENST00000556897 MTCL1Q9Y4B5 1905 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 ZBTB39O15060 712 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 ASAP2O43150 1006 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 DKC1O60832 514 aaKnown RBP eCLIP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 CDC45O75419 566 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 ZMYND10O75800 440 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 C1RP00736 705 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 P4HBP07237 508 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 FSHRP23945 695 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 HSPA4P34932 840 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 STARD6P59095 220 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 NPY5RQ15761 445 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 LILRA6Q6PI73 481 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 PARM1Q6UWI2 310 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 EXOC8Q8IYI6 725 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 GSTCDQ8NEC7 633 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 TCP11Q8WWU5 503 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 FGF14Q92915 247 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 SHDQ96IW2 340 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 LXNQ9BS40 222 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 NXF3Q9H4D5 531 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 KCNMB3Q9NPA1 279 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■□□□□ 9.1
HNRNPC-227ENST00000556897 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 FNIP2Q9P278 1114 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 COL4A3Q01955 1670 aa10.06□□□□□ -0.8
HNRNPC-227ENST00000556897 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 ARF4P18085 180 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 AKAP5P24588 427 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 AXLP30530 894 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 EVCP57679 992 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 PTENP60484 403 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 NTHL1P78549 312 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 CTTNQ14247 550 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 PCBP1Q15365 356 aaKnown RBP eCLIP10.05□□□□□ -0.83e-6■■■□□ 15.1
HNRNPC-227ENST00000556897 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 XKR9Q5GH70 373 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 RTP2Q5QGT7 225 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 PRSS55Q6UWB4 352 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 C4orf19Q8IY42 314 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 DAGLBQ8NCG7 672 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 FGF13Q92913 245 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 CCDC51Q96ER9 411 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 MTRQ99707 1265 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 XPNPEP1Q9NQW7 623 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 SPATA6Q9NWH7 488 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 ADAM28Q9UKQ2 775 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms