RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TNKSO95271 1327 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 GOLGA6L6A8MZA4 724 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 DVL2O14641 736 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 RFPL1O75677 317 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 RHOBTB3O94955 611 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 ITGB1P05556 798 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 HNRNPLP14866 589 aaKnown RBP eCLIP5.62□□□□□ -1.51
PRPF39-210ENST00000556718 ZSCAN20P17040 1043 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-210ENST00000556718 PTPAQ15257 358 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 GFOD2Q3B7J2 385 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 FAM102BQ5T8I3 360 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 KRT40Q6A162 431 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 NXNQ6DKJ4 435 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 ZZZ3Q8IYH5 903 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 TCEAL8Q8IYN2 117 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 SYNE4Q8N205 404 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 KIAA1958Q8N8K9 716 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 CLRN3Q8NCR9 226 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 JPH3Q8WXH2 748 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-210ENST00000556718 FUBP3Q96I24 572 aaKnown RBP eCLIP5.62□□□□□ -1.51
PRPF39-210ENST00000556718 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 RIOX1Q9H6W3 641 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 ACSS2Q9NR19 701 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 SLC52A1Q9NWF4 448 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 H2AFY2Q9P0M6 372 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-210ENST00000556718 PTGFRNQ9P2B2 879 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 NCDNQ9UBB6 729 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 IP6K2Q9UHH9 426 aa5.62□□□□□ -1.51
PRPF39-210ENST00000556718 ABHD16AO95870 558 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MT-CO1P00395 513 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 VCAM1P19320 739 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 GNALP38405 381 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 RECQLP46063 649 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 ERVK-21P61565 698 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 PHC1P78364 1004 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 COL4A3Q01955 1670 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 ROM1Q03395 351 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 HDAC1Q13547 482 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MLC1Q15049 377 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 TERF2Q15554 542 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 LY6G5CQ5SRR4 150 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 GPR158Q5T848 1215 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 SLFN12LQ6IEE8 588 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MFSD5Q6N075 450 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 PGM2L1Q6PCE3 622 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 KCNV1Q6PIU1 500 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 LRRC55Q6ZSA7 311 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 CPT1CQ8TCG5 803 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 ARL8AQ96BM9 186 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 NAF1Q96HR8 494 aaKnown RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 DYDC2Q96IM9 177 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MAML3Q96JK9 1138 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 WDR92Q96MX6 357 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 BBC3Q96PG8 261 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 ZNF768Q9H5H4 540 aaKnown RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 SYNPO2LQ9H987 977 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 POLR3BQ9NW08 1133 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 C14orf119Q9NWQ9 140 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 NOB1Q9ULX3 412 aaKnown RBP5.61□□□□□ -1.51
PRPF39-210ENST00000556718 SORCS3Q9UPU3 1222 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 ANKRD6Q9Y2G4 727 aa5.61□□□□□ -1.51
PRPF39-210ENST00000556718 MASP2O00187 686 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 MFAP3LO75121 409 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 ABLIM3O94929 683 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 CYP17A1P05093 508 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 HK1P19367 917 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 CD40P25942 277 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 FNTBP49356 437 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 KIF11P52732 1056 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 CSRP2Q16527 193 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 FAM214AQ32MH5 1076 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 HECTD2Q5U5R9 776 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 NAIF1Q69YI7 327 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-210ENST00000556718 CXorf57Q6NSI4 855 aaKnown RBP5.6□□□□□ -1.51
PRPF39-210ENST00000556718 C14orf80Q86SX3 495 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 ZNF610Q8N9Z0 462 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 BEND2Q8NDZ0 799 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 ST8SIA2Q92186 375 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 FAXDC2Q96IV6 333 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 KCMF1Q9P0J7 381 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 KCNG1Q9UIX4 513 aa5.6□□□□□ -1.51
PRPF39-210ENST00000556718 UBA6A0AVT1 1052 aaPredicted RBP5.59□□□□□ -1.51
PRPF39-210ENST00000556718 PLEKHD1A6NEE1 506 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 GOLGA8AA7E2F4 631 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 TGM5O43548 720 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 PEX14O75381 377 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 IPO13O94829 963 aaKnown RBP5.59□□□□□ -1.51
PRPF39-210ENST00000556718 JUNP05412 331 aaKnown RBP5.59□□□□□ -1.51
PRPF39-210ENST00000556718 MYL1P05976 194 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 SLC9A1P19634 815 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 SCAND1P57086 179 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 C21orf58P58505 322 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 KRT85P78386 507 aa5.59□□□□□ -1.51
PRPF39-210ENST00000556718 SPIDRQ14159 915 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms