RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TMEM169Q96HH4 297 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 MSLNLQ96KJ4 702 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 AK8Q96MA6 479 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 TRIM6Q9C030 488 aaPredicted RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 NT5C3AQ9H0P0 336 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 ZBP1Q9H171 429 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 ENTPD7Q9NQZ7 604 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 ARHGAP28Q9P2N2 729 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PARP2Q9UGN5 583 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PUF60Q9UHX1 559 aaKnown RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 GIT1Q9Y2X7 761 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PRG3Q9Y2Y8 225 aaPredicted RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 TRIOO75962 3097 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 C2orf71A6NGG8 1288 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 K7ERI5 159 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TNFRSF10AO00220 468 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 ABLIM1O14639 778 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 PTGESO14684 152 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 N4BP3O15049 544 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 MBTPS2O43462 519 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 NCK2O43639 380 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 RECQL4O94761 1208 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 CXCL14O95715 111 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 EFEMP2O95967 443 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 BMP15O95972 392 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 NDUFV1P49821 464 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 EFNA5P52803 228 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 DSC1Q08554 894 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 MAPK8IP2Q13387 824 aaPredicted RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 ATF7IP2Q5U623 682 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 LLGL2Q6P1M3 1020 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 DDX53Q86TM3 631 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 CEP120Q8N960 986 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 MRPL43Q8N983 215 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM161BQ8NDZ6 487 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 FEZF2Q8TBJ5 459 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 RSPH1Q8WYR4 309 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 RAD54LQ92698 747 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 ZBTB45Q96K62 511 aaPredicted RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 DRC1Q96MC2 740 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 FAM193BQ96PV7 902 aaPredicted RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 ACO2Q99798 780 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 PAAF1Q9BRP4 392 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM175Q9BSA9 504 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TARS2Q9BW92 718 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 CCSER1Q9C0I3 900 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 PTPRHQ9HD43 1115 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 NGRNQ9NPE2 291 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 UBN1Q9NPG3 1134 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 KMT5AQ9NQR1 393 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 FAN1Q9Y2M0 1017 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 GDAQ9Y2T3 454 aa8.93□□□□□ -0.98
VTI1B-206ENST00000556461 SRPRBQ9Y5M8 271 aaKnown RBP8.93□□□□□ -0.98
VTI1B-206ENST00000556461 PHLPP2Q6ZVD8 1323 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 A0A087X0B3 334 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 MEFVO15553 781 aaPredicted RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 SLC26A4O43511 780 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CLASP2O75122 1294 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 ALDH2P05091 517 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CTSAP10619 480 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 MAPTP10636 758 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 PLS3P13797 630 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CA8P35219 290 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 OR1G1P47890 313 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 DMP1Q13316 513 aaPredicted RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 GIT2Q14161 759 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 SMC1AQ14683 1233 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 SLC39A14Q15043 492 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 PTPN14Q15678 1187 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 NAB2Q15742 525 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 FOXD4L6Q3SYB3 417 aaPredicted RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 PDE12Q6L8Q7 609 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 SYCE2Q6PIF2 218 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 FOXD4L3Q6VB84 417 aaPredicted RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 ZBTB33Q86T24 672 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 GPBP1Q86WP2 473 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM130Q8N3G9 435 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 PPP2R3CQ969Q6 453 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CALML4Q96GE6 196 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 B3GALT6Q96L58 329 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 REEP2Q9BRK0 252 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 NTPCRQ9BSD7 190 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 TIPINQ9BVW5 301 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 APOL5Q9BWW9 433 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 HAPLN2Q9GZV7 340 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CDT1Q9H211 546 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CD207Q9UJ71 328 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 CDH22Q9UJ99 828 aa8.92□□□□□ -0.98
VTI1B-206ENST00000556461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 CASTOR2A6NHX0 329 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 LILRB3O75022 631 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 EPCAMP16422 314 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 PROZP22891 400 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms