RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TELO2Q9Y4R8 837 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 PCDHB7Q9Y5E2 793 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MYH7P12883 1935 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 FAM208BQ5VWN6 2430 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MYH7BA7E2Y1 1941 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 TBKBP1A7MCY6 615 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 PRMT3O60678 531 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 EOMESO95936 686 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 GHRHP01286 108 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 RPLP2P05387 115 aaKnown RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 HOXA13P31271 388 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 ATXN1P54253 815 aaKnown RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 TDGQ13569 410 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 GNPTABQ3T906 1256 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 ATAT1Q5SQI0 421 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 MARCH8Q5T0T0 291 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 FAM102BQ5T8I3 360 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 KIAA0319Q5VV43 1072 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 ETFBKMTQ8IXQ9 262 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 INPP4AQ96PE3 977 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 SENP7Q9BQF6 1050 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 TMX1Q9H3N1 280 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 CWH43Q9H720 699 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 ERVK-5Q9HDB9 667 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 ENTPD7Q9NQZ7 604 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 CYP26B1Q9NR63 512 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 TUBE1Q9UJT0 475 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 DBR1Q9UK59 544 aaKnown RBP7.9□□□□□ -1.14
ATXN3-236ENST00000556220 FBXL21Q9UKT6 434 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 DDX19BQ9UMR2 479 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 PCDHA1Q9Y5I3 950 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 HCFC2Q9Y5Z7 792 aa7.9□□□□□ -1.14
ATXN3-236ENST00000556220 KIAA1217Q5T5P2 1943 aa7.9□□□□□ -1.15
ATXN3-236ENST00000556220 USP24Q9UPU5 2620 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 GCOM1H8Y6P7 765 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 J3QW42 95 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 DHX16O60231 1041 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 CLASP2O75122 1294 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 DEAF1O75398 565 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 STAM2O75886 525 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 WEE2P0C1S8 567 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 POLR2MP0CAP2 368 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 PCP11498 1178 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 LAG3P18627 525 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 NOS3P29474 1203 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 MRPS9P82933 396 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 PAK2Q13177 524 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 ASPRV1Q53RT3 343 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 KIAA1841Q6NSI8 718 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 ZC3H14Q6PJT7 736 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 MFSD6Q6ZSS7 791 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 TMC7Q7Z402 723 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 CACTIN-AS1Q8N1I8 211 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 MRPL43Q8N983 215 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 ACSF2Q96CM8 615 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 SRA1Q9HD15 236 aaKnown RBP7.89□□□□□ -1.15
ATXN3-236ENST00000556220 ERAP1Q9NZ08 941 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 DUSP12Q9UNI6 340 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 TRPV2Q9Y5S1 764 aa7.89□□□□□ -1.15
ATXN3-236ENST00000556220 CACNA1IQ9P0X4 2223 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 CNOT1A5YKK6 2376 aaKnown RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 C2orf71A6NGG8 1288 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 RRN3P2A6NIE6 340 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 M0QZ92 97 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 FIBPO43427 364 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 MGEA5O60502 916 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 PPP1R11O60927 126 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 PARP1P09874 1014 aaKnown RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SP9P0CG40 484 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 IBSPP21815 317 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 TCF7P36402 384 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SP4Q02446 784 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 KRT17Q04695 432 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 RARS2Q5T160 578 aaKnown RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SLC24A5Q71RS6 500 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 MAP4K3Q8IVH8 894 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM130Q8N3G9 435 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 C12orf76Q8N812 135 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SUMF1Q8NBK3 374 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 PI4K2BQ8TCG2 481 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SEPT1Q8WYJ6 367 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 ZBTB10Q96DT7 871 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 MTMR8Q96EF0 704 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 ZKSCAN3Q9BRR0 538 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 SAP130Q9H0E3 1048 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 FAM49AQ9H0Q0 323 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 CHMP4BQ9H444 224 aaKnown RBP7.88□□□□□ -1.15
ATXN3-236ENST00000556220 KAT14Q9H8E8 782 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 RGS18Q9NS28 235 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 C1orf112Q9NSG2 853 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 RTEL1Q9NZ71 1219 aa7.88□□□□□ -1.15
ATXN3-236ENST00000556220 WNT16Q9UBV4 365 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms