RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 SLC24A5Q71RS6 500 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 SFR1Q86XK3 245 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 MYCT1Q8N699 235 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 TMEM161BQ8NDZ6 487 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 ENGASEQ8NFI3 743 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 PBX4Q9BYU1 374 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 TRIM9Q9C026 710 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 GZF1Q9H116 711 aaPredicted RBP9.88□□□□□ -0.83
CHD8-210ENST00000555962 BLZF1Q9H2G9 400 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 ZHX3Q9H4I2 956 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 PARVGQ9HBI0 331 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 CHST12Q9NRB3 414 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 CDH23Q9H251 3354 aa9.88□□□□□ -0.83
CHD8-210ENST00000555962 PLXNA4Q9HCM2 1894 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 CNTNAP2Q9UHC6 1331 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 COL4A4P53420 1690 aaPredicted RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 LCHNA4D1U4 455 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 GOLGA6L4A6NEF3 574 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 ACKR2O00590 384 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 TBCAO75347 108 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 ARHGEF15O94989 841 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 ZNF202O95125 648 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 MAPTP10636 758 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 IDEP14735 1019 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 GATMP50440 423 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 EFNA5P52803 228 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 SMAD3P84022 425 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 SNW1Q13573 536 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 CUL4BQ13620 913 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 PCBP1Q15365 356 aaKnown RBP eCLIP9.87□□□□□ -0.836e-7■■□□□ 12.7
CHD8-210ENST00000555962 MAPK6Q16659 721 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 EEF1DP3Q658K8 133 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 TWF2Q6IBS0 349 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 CNNM4Q6P4Q7 775 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 KRBA2Q6ZNG9 492 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 CLEC17AQ6ZS10 378 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 FAM43BQ6ZT52 329 aaPredicted RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 HAUS6Q7Z4H7 955 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 ECHDC2Q86YB7 292 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 CEP57L1Q8IYX8 460 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 FMR1NBQ8N0W7 255 aaPredicted RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 PAGE5Q96GU1 130 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 PRIMPOLQ96LW4 560 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 C7orf25Q9BPX7 421 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 PYM1Q9BRP8 204 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 EIF2AQ9BY44 585 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 FGFBP2Q9BYJ0 223 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 RC3H2Q9HBD1 1191 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 C1orf112Q9NSG2 853 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 RNF19AQ9NV58 838 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 PRMT7Q9NVM4 692 aaPredicted RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 TBC1D7Q9P0N9 293 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 LARSQ9P2J5 1176 aaKnown RBP9.87□□□□□ -0.83
CHD8-210ENST00000555962 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 MYO7AQ13402 2215 aa9.87□□□□□ -0.83
CHD8-210ENST00000555962 A0A0U1RQF3 1178 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 A0A1B0GUA9 196 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 MEIS3P2A8K0S8 358 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 K7ENM7 598 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 K7ERI5 159 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 TLL1O43897 1013 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 DGKIO75912 1065 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 GAP43P17677 238 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 AXLP30530 894 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 FXR1P51114 621 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD8-210ENST00000555962 SMTNP53814 917 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 ASIC1P78348 528 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 HTRA4P83105 476 aaPredicted RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 AMPD3Q01432 767 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 COASYQ13057 564 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 PUS10Q3MIT2 529 aaKnown RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 ZC2HC1CQ53FD0 456 aaPredicted RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 SPRED2Q7Z698 418 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 NPAS4Q8IUM7 802 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 FAM178BQ8IXR5 827 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 SMG8Q8ND04 991 aaKnown RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 KCNN1Q92952 543 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 LPPQ93052 612 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 HPS3Q969F9 1004 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 ZNF689Q96CS4 500 aaPredicted RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 TARS2Q9BW92 718 aaKnown RBP9.86□□□□□ -0.83
CHD8-210ENST00000555962 LRRC27Q9C0I9 530 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 NKX2-4Q9H2Z4 354 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 PDZD7Q9H5P4 517 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 FAM105AQ9NUU6 356 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 PANK4Q9NVE7 773 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 TMEM161AQ9NX61 479 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 DACT1Q9NYF0 836 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 USP25Q9UHP3 1055 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 SLC27A5Q9Y2P5 690 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 PCDHB2Q9Y5E7 798 aa9.86□□□□□ -0.83
CHD8-210ENST00000555962 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms