RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 TNFSF13BQ9Y275 285 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 TDRD15B5MCY1 1934 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 TBCAO75347 108 aaKnown RBP15.08■□□□□ 0
SHMT2-219ENST00000555563 RECQL4O94761 1208 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 FAM13AO94988 1023 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 BRD1O95696 1058 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 GALTP07902 379 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 MAPTP10636 758 aaKnown RBP15.08■□□□□ 0
SHMT2-219ENST00000555563 DDIT3P35638 169 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 KCNQ1P51787 676 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 ZNF131P52739 623 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 SMTNP53814 917 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 NCKAP1LP55160 1127 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 DNM1Q05193 864 aaKnown RBP15.08■□□□□ 0
SHMT2-219ENST00000555563 DCAF4L1Q3SXM0 396 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 ZNF568Q3ZCX4 644 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 PLPP4Q5VZY2 271 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 TMEM169Q96HH4 297 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 ACO2Q99798 780 aaKnown RBP15.08■□□□□ 0
SHMT2-219ENST00000555563 TCF25Q9BQ70 676 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 TARS2Q9BW92 718 aaKnown RBP15.08■□□□□ 0
SHMT2-219ENST00000555563 CDT1Q9H211 546 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 PARVGQ9HBI0 331 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 MIOSQ9NXC5 875 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0
SHMT2-219ENST00000555563 REV3LO60673 3130 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 MYO7AQ13402 2215 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
SHMT2-219ENST00000555563 CUTAO60888 179 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 KCNA5P22460 613 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 STAT6P42226 847 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 KRT17Q04695 432 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 DSC1Q08554 894 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 GRIK3Q13003 919 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 STRN3Q13033 797 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 BECN1Q14457 450 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 ATL3Q6DD88 541 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 SHC4Q6S5L8 630 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 CCDC73Q6ZRK6 1079 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PDILTQ8N807 584 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 KCNG4Q8TDN1 519 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 MICAL1Q8TDZ2 1067 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PPP2R3CQ969Q6 453 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PABPC5Q96DU9 382 aaKnown RBP15.07■□□□□ 0
SHMT2-219ENST00000555563 IGSF21Q96ID5 467 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 FAM193BQ96PV7 902 aaPredicted RBP15.07■□□□□ 0
SHMT2-219ENST00000555563 RPS6KC1Q96S38 1066 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 TMEM175Q9BSA9 504 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 ZHX3Q9H4I2 956 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PTPRHQ9HD43 1115 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 SNTG2Q9NY99 539 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
SHMT2-219ENST00000555563 KCNG1Q9UIX4 513 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 GDAQ9Y2T3 454 aa15.07■□□□□ 0
SHMT2-219ENST00000555563 CARNS1A5YM72 827 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 H0YCG3 227 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 K7ENM7 598 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 ABLIM1O14639 778 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 PROZP22891 400 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 NRIP1P48552 1158 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 AAK1Q2M2I8 961 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 AXDND1Q5T1B0 1012 aaPredicted RBP15.06■□□□□ 0
SHMT2-219ENST00000555563 PDE12Q6L8Q7 609 aaKnown RBP15.06■□□□□ 0
SHMT2-219ENST00000555563 EP400NLQ6ZTU2 488 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 DYMQ7RTS9 669 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 APBB1IPQ7Z5R6 666 aaPredicted RBP15.06■□□□□ 0
SHMT2-219ENST00000555563 RBM23Q86U06 439 aaKnown RBP15.06■□□□□ 0
SHMT2-219ENST00000555563 MYCT1Q8N699 235 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 CEP120Q8N960 986 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 ADAMTS19Q8TE59 1207 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 DDX12PQ92771 950 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 CHAMP1Q96JM3 812 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 VN1R3Q9BXE9 311 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 PANK2Q9BZ23 570 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 CXCL16Q9H2A7 254 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 IGFLR1Q9H665 355 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 CLDND1Q9NY35 253 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 CFAP45Q9UL16 551 aa15.06■□□□□ 0
SHMT2-219ENST00000555563 PRG3Q9Y2Y8 225 aaPredicted RBP15.06■□□□□ 0
SHMT2-219ENST00000555563 MYMKA6NI61 221 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 H3BQ06 376 aaPredicted RBP15.05■□□□□ -0
SHMT2-219ENST00000555563 PTGESO14684 152 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 NRP1O14786 923 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 LINC01565O15544 149 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 TRAK2O60296 914 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 TBX10O75333 385 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 HARSP12081 509 aaKnown RBP15.05■□□□□ -0
SHMT2-219ENST00000555563 ME1P48163 572 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 CTC1Q2NKJ3 1217 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 MPZL3Q6UWV2 235 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 SV2BQ7L1I2 683 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 ZBTB33Q86T24 672 aa15.05■□□□□ -0
SHMT2-219ENST00000555563 DDX53Q86TM3 631 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms