RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	NEK3	P51956	506 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	LLGL1	Q15334	1064 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	MAN2A1	Q16706	1144 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	UBXN11	Q5T124	520 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	GJC2	Q5T442	439 aa	Predicted RBP	5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	TRMT10B	Q6PF06	316 aa	Known RBP	5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	C11orf96	Q7Z7L8	435 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	FAM156A	Q8NDB6	213 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	RIN2	Q8WYP3	895 aa	Predicted RBP	5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	DPF2	Q92785	391 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	MBD6	Q96DN6	1003 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	WDR92	Q96MX6	357 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	DNAI1	Q9UI46	699 aa		5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	CFAP20	Q9Y6A4	193 aa	Known RBP	5.53	□□□□□ -1.52
KTN1-222	ENST00000555506	C9orf118	A6NHY6	69 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	FAM171A2	A8MVW0	826 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	TMEM127	O75204	238 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	LY86	O95711	162 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	CYP1A1	P04798	512 aa	Predicted RBP	5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	IL12RB1	P42701	662 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	CD69	Q07108	199 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	IL10RA	Q13651	578 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	NOMO1	Q15155	1222 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	CCDC149	Q6ZUS6	474 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	SMC5	Q8IY18	1101 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	GPR156	Q8NFN8	814 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	NUDT10	Q8NFP7	164 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	OR2I1P	Q8NGU4	316 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	NKD2	Q969F2	451 aa	Predicted RBP	5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	NUDT11	Q96G61	164 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	LCOR	Q96JN0	433 aa	Predicted RBP	5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	BDH2	Q9BUT1	245 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506	MYRF	Q9Y2G1	1151 aa		5.52	□□□□□ -1.53
KTN1-222	ENST00000555506		A0A1W2PR48	441 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PMM2	O15305	246 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	KLHL18	O94889	574 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	FSBP	O95073	299 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	RPLP2	P05387	115 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	CTSS	P25774	331 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	HTR1B	P28222	390 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	FAM193A	P78312	1265 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	KIAA2012	Q0VF49	1180 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	EIF4H	Q15056	248 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	VPS72	Q15906	364 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PPP4R3A	Q6IN85	833 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	KIAA0319L	Q8IZA0	1049 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	UNC5B	Q8IZJ1	945 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	KAT5	Q92993	513 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	CGRRF1	Q99675	332 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	C7orf25	Q9BPX7	421 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	LRFN3	Q9BTN0	628 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	B3GNT5	Q9BYG0	378 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	TMEM168	Q9H0V1	697 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	KMT5A	Q9NQR1	393 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	RPTOR	Q8N122	1335 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	AKR1B10	O60218	316 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	B4GALT3	O60512	393 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PHF2	O75151	1096 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	LDHA	P00338	332 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	LTA4H	P09960	611 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	POLD1	P28340	1107 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	AGFG1	P52594	562 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	DSC2	Q02487	901 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	ANO6	Q4KMQ2	910 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	THEMIS2	Q5TEJ8	643 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	NPNT	Q6UXI9	565 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	TTC7B	Q86TV6	843 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	FAM124A	Q86V42	546 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	LGI4	Q8N135	537 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	HOXB13	Q92826	284 aa	Predicted RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	STRBP	Q96SI9	672 aa	Known RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	CDC42EP3	Q9UKI2	254 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	L1RE1	Q9UN81	338 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	VWA7	Q9Y334	891 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PCDHB1	Q9Y5F3	818 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	PCDHA13	Q9Y5I0	950 aa		5.51	□□□□□ -1.53
KTN1-222	ENST00000555506	SLC16A6	O15403	523 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	SGTA	O43765	313 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	PRAMEF4	O60810	478 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	ENDOD1	O94919	500 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	FTL	P02792	175 aa	Predicted RBP	5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	GAA	P10253	952 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	INSRR	P14616	1297 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	STAT5B	P51692	787 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	KCNQ1	P51787	676 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	ZNF280A	P59817	542 aa	Predicted RBP	5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	SEPT2	Q15019	361 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	KIAA0753	Q2KHM9	967 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	LONRF3	Q496Y0	759 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	C19orf54	Q5BKX5	351 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	ABHD15	Q6UXT9	468 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	DAAM2	Q86T65	1068 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	RHOT1	Q8IXI2	618 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	DRC7	Q8IY82	874 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	IFNL2	Q8IZJ0	200 aa		5.5	□□□□□ -1.53
KTN1-222	ENST00000555506	NSUN6	Q8TEA1	469 aa	Known RBP	5.5	□□□□□ -1.53

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