RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 ZMYM2Q9UBW7 1377 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 MAPTP10636 758 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 CA8P35219 290 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 SCNN1GP51170 649 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 GIT2Q14161 759 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 AAK1Q2M2I8 961 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 TCEAL5Q5H9L2 206 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 NT5DC1Q5TFE4 455 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 DYMQ7RTS9 669 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 IQUBQ8NA54 791 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 TMEM161BQ8NDZ6 487 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 DDX12PQ92771 950 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 HLA-CQ95604 372 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 DHX58Q96C10 678 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 ACO2Q99798 780 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 NTPCRQ9BSD7 190 aaKnown RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
SRP54-206ENST00000555317 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 ANKFY1Q9P2R3 1169 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 COG5Q9UP83 839 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 USP20Q9Y2K6 914 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 TCHHQ07283 1943 aa13.28□□□□□ -0.28
SRP54-206ENST00000555317 NCOR1O75376 2440 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TTLL13PA6NNM8 815 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
SRP54-206ENST00000555317 NCK2O43639 380 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TRAK2O60296 914 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 RECQL4O94761 1208 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 IDEP14735 1019 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 GAP43P17677 238 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 ZNF131P52739 623 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 NCKAP1LP55160 1127 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 NUCB2P80303 420 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 AMPD3Q01432 767 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 PLCB3Q01970 1234 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 NOLC1Q14978 699 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRP54-206ENST00000555317 EEF1DP3Q658K8 133 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
SRP54-206ENST00000555317 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 HAUS6Q7Z4H7 955 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 ZBTB33Q86T24 672 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 SLC39A11Q8N1S5 342 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TMEM87AQ8NBN3 555 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.29
SRP54-206ENST00000555317 SCAND2PQ9GZW5 306 aaPredicted RBP13.27□□□□□ -0.29
SRP54-206ENST00000555317 NRDE2Q9H7Z3 1164 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 MAGEF1Q9HAY2 307 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TOPORSQ9NS56 1045 aaPredicted RBP13.27□□□□□ -0.29
SRP54-206ENST00000555317 SNTG2Q9NY99 539 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 STK39Q9UEW8 545 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 PCDHA7Q9UN72 937 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 ATG2AQ2TAZ0 1938 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 CITO14578 2027 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 TTC28Q96AY4 2481 aa13.27□□□□□ -0.29
SRP54-206ENST00000555317 FSD2A1L4K1 749 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 NT5C1B-RDH14C9J2C7 533 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 TOM1L1O75674 476 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 ALDH2P05091 517 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 EDN1P05305 212 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 MCF2P10911 925 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 OR1G1P47890 313 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 LIG4P49917 911 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 GRIK3Q13003 919 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 AXDND1Q5T1B0 1012 aaPredicted RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 PLPP4Q5VZY2 271 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 TMC7Q7Z402 723 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 TCF25Q9BQ70 676 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 TNMDQ9H2S6 317 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 PRDM6Q9NQX0 595 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 SEL1LQ9UBV2 794 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 RCOR1Q9UKL0 485 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
SRP54-206ENST00000555317 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
SRP54-206ENST00000555317 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 A0A087X0B3 334 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 MYMKA6NI61 221 aa13.25□□□□□ -0.29
SRP54-206ENST00000555317 INPPL1O15357 1258 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms