RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 L3MBTL1Q9Y468 752 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 LOXHD1Q8IVV2 1947 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 EML1O00423 815 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 DDX3XO00571 662 aaKnown RBP eCLIP11.48□□□□□ -0.571e-15■■■■□ 20.8
MTHFD1-210ENST00000555252 RIPK2O43353 540 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 SLITRK3O94933 977 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 SLC9A1P19634 815 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 GALCP54803 685 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 KCNJ2P63252 427 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 JAG1P78504 1218 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 CYP4A11Q02928 519 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 RBBP5Q15291 538 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 ANKRD20A2Q5SQ80 823 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 ANKRD20A1Q5TYW2 823 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 ANKRD20A3Q5VUR7 823 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 C1orf186Q6ZWK4 172 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 MORC4Q8TE76 937 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 CTNNBL1Q8WYA6 563 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 GRHL1Q9NZI5 618 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 PFASO15067 1338 aa11.48□□□□□ -0.57
MTHFD1-210ENST00000555252 GAS7O60861 476 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 VIL1P09327 827 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 ALAS1P13196 640 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 PTGIRP43119 386 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 PLTPP55058 493 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 AUHQ13825 339 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 MYBPC2Q14324 1141 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 DCAF17Q5H9S7 520 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SPDYAQ5MJ70 313 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 C11orf63Q6NUN7 778 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 HS2ST1Q7LGA3 356 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SPATA21Q7Z572 469 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FBXO25Q8TCJ0 367 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 DYDC1Q8WWB3 177 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 DYDC2Q96IM9 177 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 GOLPH3Q9H4A6 298 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SCN9AQ15858 1988 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FRMPD4Q14CM0 1322 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TGFB1I1O43294 461 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TBC1D12O60347 775 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CFBP00751 764 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 ACTN1P12814 892 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CTNNA2P26232 953 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 IFI35P80217 286 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 ENOX2Q16206 610 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CYP1B1Q16678 543 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CEP55Q53EZ4 464 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 DCAF12L1Q5VU92 463 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TCERG1LQ5VWI1 586 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TPH2Q8IWU9 490 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 UBL4BQ8N7F7 174 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SLC35G2Q8TBE7 412 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 MICAL1Q8TDZ2 1067 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FBF1Q8TES7 1133 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 VTI1AQ96AJ9 217 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 WDR18Q9BV38 432 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 LRRC4CQ9HCJ2 640 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 ZFATQ9P243 1243 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 LRRC42Q9Y546 428 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
MTHFD1-210ENST00000555252 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 TLDC2A0PJX2 215 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 SPDYE6P0CI01 402 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 NEFHP12036 1026 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 VCAM1P19320 739 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 RFX1P22670 979 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 AGGF1Q8N302 714 aaeCLIP11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 ART4Q93070 314 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 NAF1Q96HR8 494 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 RIT2Q99578 217 aa11.46□□□□□ -0.57
MTHFD1-210ENST00000555252 TRIM31Q9BZY9 425 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms