RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 CCDC25Q86WR0 208 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 FAM186BQ8IYM0 893 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
MARK3-209ENST00000555235 MKNK1Q9BUB5 465 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 ZMYM2Q9UBW7 1377 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 LY75O60449 1722 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 RAD21O60216 631 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
MARK3-209ENST00000555235 RFX1P22670 979 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 POLD1P28340 1107 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 SCNN1DP51172 638 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 CYP4A11Q02928 519 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 NFIAQ12857 509 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
MARK3-209ENST00000555235 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
MARK3-209ENST00000555235 AADACL2Q6P093 401 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 ARHGEF18Q6ZSZ5 1173 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 MAGEB18Q96M61 343 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 EIF2AK1Q9BQI3 630 aaKnown RBP17.16■□□□□ 0.34
MARK3-209ENST00000555235 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 WNT8AQ9H1J5 351 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 CTTNBP2NLQ9P2B4 639 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 RABGAP1Q9Y3P9 1069 aa17.16■□□□□ 0.34
MARK3-209ENST00000555235 ABLIM1O14639 778 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 EIF3DO15371 548 aaKnown RBP eCLIP17.15■□□□□ 0.34
MARK3-209ENST00000555235 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 ADRA2BP18089 450 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 CDC25CP30307 473 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 STX2P32856 288 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 KIF22Q14807 665 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
MARK3-209ENST00000555235 AP1ARQ63HQ0 302 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 RINT1Q6NUQ1 792 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 ANKRD42Q8N9B4 389 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 KRT35Q92764 455 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 OSBPL1AQ9BXW6 950 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 IKZF4Q9H2S9 585 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 TAS2R14Q9NYV8 317 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 APEX2Q9UBZ4 518 aa17.15■□□□□ 0.34
MARK3-209ENST00000555235 EML1O00423 815 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 ECEL1O95672 775 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 GYS1P13807 737 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 SNAP25P60880 206 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 MTFR1Q15390 333 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 SIAH1Q8IUQ4 282 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 APLFQ8IW19 511 aaPredicted RBP17.14■□□□□ 0.33
MARK3-209ENST00000555235 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
MARK3-209ENST00000555235 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 C12orf50Q8NA57 414 aaPredicted RBP17.14■□□□□ 0.33
MARK3-209ENST00000555235 WHRNQ9P202 907 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 ABL2P42684 1182 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 STRN3Q13033 797 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 CMPK2Q5EBM0 449 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 SP8Q8IXZ3 490 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 RNPEPL1Q9HAU8 725 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 PTPN22Q9Y2R2 807 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 LRRC42Q9Y546 428 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 THSD7AQ9UPZ6 1657 aa17.14■□□□□ 0.33
MARK3-209ENST00000555235 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 ANKRD63C9JTQ0 380 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 ACSL3O95573 720 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 BRAFP15056 766 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 NMT1P30419 496 aaKnown RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 PEX5P50542 639 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 PPP1R21Q6ZMI0 780 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 MIGA2Q7L4E1 593 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 SLC13A5Q86YT5 568 aaPredicted RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 ZDHHC14Q8IZN3 488 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 AGGF1Q8N302 714 aaeCLIP17.13■□□□□ 0.33
MARK3-209ENST00000555235 GDAP1Q8TB36 358 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 AGPAT1Q99943 283 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 NKIRAS1Q9NYS0 192 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 AHCYL1O43865 530 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 TCEA3O75764 348 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 FESP07332 822 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 CYP3A4P08684 503 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 CREB1P16220 341 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 GNAZP19086 355 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 CALB2P22676 271 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 GPC5P78333 572 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
MARK3-209ENST00000555235 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
MARK3-209ENST00000555235 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms