RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 HSPBP1Q9NZL4 362 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 PFASO15067 1338 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 ANKRD63C9JTQ0 380 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 AGTP01019 485 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RARAP10276 462 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PPP2R5CQ13362 524 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 ZKSCAN8Q15776 578 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 SLC15A2Q16348 729 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 FAM102BQ5T8I3 360 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 TATDN1Q6P1N9 297 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 SLC47A2Q86VL8 602 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 ZSWIM2Q8NEG5 633 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PCDHB18PQ96TA0 734 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PLVAPQ9BX97 442 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 HOMER3Q9NSC5 361 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RASSF9O75901 435 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PAEPP09466 180 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 NUDT17P0C025 328 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 GBP1P32455 592 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PTGIRP43119 386 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 MFAP3P55082 362 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 NBPF9Q3BBW0 867 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 EPC2Q52LR7 807 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 C11orf63Q6NUN7 778 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 GDAP1Q8TB36 358 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PGM2Q96G03 612 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 FBXO28Q9NVF7 368 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 GRHL1Q9NZI5 618 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 TBK1Q9UHD2 729 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 TPX2Q9ULW0 747 aaKnown RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 UBE4BO95155 1302 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 C5orf60A6NFR6 353 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 CALCAP01258 141 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RFX1P22670 979 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 PDE6CP51160 858 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RASA3Q14644 834 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 HAUS6Q7Z4H7 955 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 ARHGEF2Q92974 986 aaKnown RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RUNDC3BQ96NL0 473 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 IDI2Q9BXS1 227 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 GPRC5CQ9NQ84 441 aa10.2□□□□□ -0.78
SYNE2-213ENST00000554805 CTDP1Q9Y5B0 961 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-213ENST00000554805 RPTORQ8N122 1335 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 RIPK2O43353 540 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 MYCLP12524 364 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 ADCY8P40145 1251 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 RRP1BQ14684 758 aaKnown RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CCT6BQ92526 530 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 FIZ1Q96SL8 496 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 EPB41L4BQ9H329 900 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 WNK3Q9BYP7 1800 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 ATP8B3O60423 1300 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 RPSAP08865 295 aaKnown RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 MAPK4P31152 587 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 GBP2P32456 591 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 MMP13P45452 471 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 KRT17Q04695 432 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 NEDD9Q14511 834 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 XKR9Q5GH70 373 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 STRIP1Q5VSL9 837 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 NUGGCQ68CJ6 796 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 LDHDQ86WU2 507 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 ATG4AQ8WYN0 398 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 P3H4Q92791 437 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 KIFAP3Q92845 792 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 PRMT6Q96LA8 375 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 NT5C1BQ96P26 610 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 RPS6KC1Q96S38 1066 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 SYT11Q9BT88 431 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 HEMGNQ9BXL5 484 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CXorf56Q9H5V9 222 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 ANAPC7Q9UJX3 599 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CCPG1Q9ULG6 757 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 THAP12O43422 761 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 GGPS1O95749 300 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 RARGP13631 454 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 PDE6BP35913 854 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 ZNF131P52739 623 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 DRG2P55039 364 aaKnown RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 NFIL3Q16649 462 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CBWD2Q8IUF1 395 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 DAW1Q8N136 415 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 OLIG1Q8TAK6 271 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 DHX38Q92620 1227 aaKnown RBP10.19□□□□□ -0.78
SYNE2-213ENST00000554805 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 CENPTQ96BT3 561 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms