RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PTPN11Q06124 597 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FAAP100Q0VG06 881 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 AP1B1Q10567 949 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FAPQ12884 760 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GALEQ14376 348 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CBX2Q14781 532 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 OCLNQ16625 522 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 IMMTQ16891 758 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RNFT1Q5M7Z0 435 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM240Q5SV17 173 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 C9orf50Q5SZB4 431 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 C12orf60Q5U649 245 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SLC6A19Q695T7 634 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PI16Q6UXB8 463 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RNF180Q86T96 592 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MAPKAPK5Q8IW41 473 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TCEAL8Q8IYN2 117 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TEX9Q8N6V9 391 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PCSK9Q8NBP7 692 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GMCL1P1Q8NEA9 526 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CHST13Q8NET6 341 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 IPMKQ8NFU5 416 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TNIP2Q8NFZ5 429 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 BRSK1Q8TDC3 778 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CHAC2Q8WUX2 184 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 BAP1Q92560 729 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 ANAPC16Q96DE5 110 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RADILQ96JH8 1075 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FGD4Q96M96 766 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TCEANC2Q96MN5 208 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 DBNDD2Q9BQY9 259 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MRPL9Q9BYD2 267 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SLC13A1Q9BZW2 595 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SENP6Q9GZR1 1112 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CCDC68Q9H2F9 335 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 NCOA5Q9HCD5 579 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 DCP1AQ9NPI6 582 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 NLRC4Q9NPP4 1024 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 ETAA1Q9NY74 926 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 NYAP2Q9P242 653 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 EGFL7Q9UHF1 273 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF214Q9UL59 606 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PALD1Q9ULE6 856 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PHTF1Q9UMS5 762 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 HCN4Q9Y3Q4 1203 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 EPN1Q9Y6I3 576 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 EIF3FO00303 357 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 VWA5AO00534 786 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 TNFRSF21O75509 655 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 DNTTP04053 509 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 RARBP10826 455 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 CYP7A1P22680 504 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 AP2B1P63010 937 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 DYNLL1P63167 89 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 IRX1P78414 480 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM132BQ14DG7 1078 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 UBE3CQ15386 1083 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 KIAA1755Q5JYT7 1200 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 MEI1Q5TIA1 1274 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 RCSD1Q6JBY9 416 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ARHGEF18Q6ZSZ5 1173 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ENOSF1Q7L5Y1 443 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 FAM126BQ8IXS8 530 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 CEP57L1Q8IYX8 460 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 SLC7A5P1Q8MH63 180 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PHOSPHO2Q8TCD6 241 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PI4K2BQ8TCG2 481 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ACER1Q8TDN7 264 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 RSRC1Q96IZ7 334 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 JAKMIP1Q96N16 626 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ASB2Q96Q27 587 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 NUDT16L1Q9BRJ7 211 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 CRNKL1Q9BZJ0 848 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 IL23AQ9NPF7 189 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 STARD7Q9NQZ5 370 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 NFKBIL1Q9UBC1 381 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 FBXO40Q9UH90 709 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 FAM184BQ9ULE4 1060 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 TMEM98Q9Y2Y6 226 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PCDHA11Q9Y5I1 949 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 MAGEB6P1A0A0J9YX57 407 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ALG1L2C9J202 215 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ARVCFO00192 962 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 BIN1O00499 593 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PLOD3O60568 738 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 DXOO77932 396 aaKnown RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 TGDSO95455 350 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 SNAI1O95863 264 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 XRCC6P12956 609 aaKnown RBP eCLIP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 FOSL2P15408 326 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ATP5JP18859 108 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ITGB8P26012 769 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PBLDP30039 288 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-206ENST00000554429 CYP2C19P33261 490 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ADCYAP1R1P41586 468 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 PLCD1P51178 756 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 ACLYP53396 1101 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 LIMK1P53667 647 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 EPHB4P54760 987 aa2.97□□□□□ -1.93
PRPF39-206ENST00000554429 TPD52P55327 224 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms