RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SAFBQ15424 915 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 GAB4Q2WGN9 574 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ARHGAP29Q52LW3 1261 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CBLL1Q75N03 491 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 MIGA2Q7L4E1 593 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 NECAB2Q7Z6G3 386 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 THAP5Q7Z6K1 395 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 PPFIBP1Q86W92 1011 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 DEFB123Q8N688 67 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CEP112Q8N8E3 955 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 HNRNPLLQ8WVV9 542 aaKnown RBP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 APPBP2Q92624 585 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ERCC4Q92889 916 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 SIL1Q9H173 461 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ARFGAP3Q9NP61 516 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 IFNKQ9P0W0 207 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ORC3Q9UBD5 711 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ZNF112Q9UJU3 913 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 HPSEQ9Y251 543 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 STXBP5LQ9Y2K9 1186 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ZSWIM8A7E2V4 1837 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CCDC196A0A1B0GTZ2 297 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 ZNF213O14771 459 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TNPO2O14787 897 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 PRC1O43663 620 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TADA3O75528 432 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 CLEC3AO75596 197 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 RNASE1P07998 156 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 CCDC175P0C221 793 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 PNMA6AP0CW24 399 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 PFKFB1P16118 471 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 CASQ1P31415 396 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 NDUFA8P51970 172 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 MOGSQ13724 837 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 GNL2Q13823 731 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TRIM14Q14142 442 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 NCAPHQ15003 741 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 DPCR1Q3MIW9 517 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 LRIT3Q3SXY7 679 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 RILPL1Q5EBL4 403 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 AXDND1Q5T1B0 1012 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 NT5DC1Q5TFE4 455 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 RESP18Q5W5W9 173 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 APOBEC3HQ6NTF7 200 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 ARMCX5Q6P1M9 558 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 SYT10Q6XYQ8 523 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 STOX1Q6ZVD7 989 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 FASTKD5Q7L8L6 764 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TMC3Q7Z5M5 1100 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 MB21D2Q8IYB1 491 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 ENOX1Q8TC92 643 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 FAM151AQ8WW52 585 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 GOLGA1Q92805 767 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 EXOC4Q96A65 974 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 TCEANC2Q96MN5 208 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 DEFB118Q96PH6 123 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 PANX2Q96RD6 677 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 GDF15Q99988 308 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
VPS33B-203ENST00000554264 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 GABRQQ9UN88 632 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 SLC45A1Q9Y2W3 748 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 SZT2Q5T011 3432 aa6.61□□□□□ -1.35
VPS33B-203ENST00000554264 DOCK2Q92608 1830 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 KLF18A0A0U1RQI7 1052 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 A0A1B0GVL5 298 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 A0A1W2PQH9 124 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 GOLIM4O00461 696 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 SHOXO15266 292 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 CYP2C8P10632 490 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 TPP2P29144 1249 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 LIFRP42702 1097 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 FLT3LGP49771 235 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 CEBPZQ03701 1054 aaKnown RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 ZP2Q05996 745 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 SPAG1Q07617 926 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 ALX1Q15699 326 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 ZNF792Q3KQV3 632 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 FILIP1LQ4L180 1135 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 EPHA10Q5JZY3 1008 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 GORABQ5T7V8 394 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 SGMS1Q86VZ5 419 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 TDHQ8IZJ6 230 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 GOLGA5Q8TBA6 731 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 SMARCE1Q969G3 411 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 COA7Q96BR5 231 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms