RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SERPINB12Q96P63 405 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 HGH1Q9BTY7 390 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 MMRN2Q9H8L6 949 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 KCNK9Q9NPC2 374 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 DNAJB4Q9UDY4 337 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 ZFP69BQ9UJL9 534 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 TTC7AQ9ULT0 858 aaPredicted RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 DMTF1Q9Y222 760 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 ANKRD36CQ5JPF3 1778 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 A0A087X0T9 212 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 FOXO6A8MYZ6 492 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CCDC22O60826 627 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 TPPPO94811 219 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 DEXIO95424 95 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 IGKV5-2P06315 115 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 FAM228BP0C875 321 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 BRAFP15056 766 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ENDOUP21128 410 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 RPL5P46777 297 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 RHBDL3P58872 404 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 RAB15P59190 212 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 NAA20P61599 178 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 DR1Q01658 176 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 THOC5Q13769 683 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 TGFBIQ15582 683 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 IL17AQ16552 155 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 LONRF1Q17RB8 773 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 NADK2Q4G0N4 442 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 FAM209AQ5JX71 171 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 DHRS4L2Q6PKH6 230 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 UGT2A3Q6UWM9 527 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CRACR2BQ8N4Y2 399 aaPredicted RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 OR6Y1Q8NGX8 325 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 SYN2Q92777 582 aaPredicted RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 SH3GL1Q99961 368 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 NEURL2Q9BR09 285 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 MRPL46Q9H2W6 279 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 PSTPIP2Q9H939 334 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 PHTF1Q9UMS5 762 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 SNX24Q9Y343 169 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 GPC6Q9Y625 555 aaPredicted RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 ADGRA3Q8IWK6 1321 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 PXDNQ92626 1479 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 MYH14Q7Z406 1995 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 KCNQ3O43525 872 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 MYCLP1P12525 358 aaPredicted RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 UQCRBP14927 111 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ATP5DP30049 168 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 TMED10P49755 219 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 PPIDQ08752 370 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 EXOC3L4Q17RC7 722 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 PUS10Q3MIT2 529 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 C6orf183Q5T699 404 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 METTL21CQ5VZV1 264 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ARHGEF18Q6ZSZ5 1173 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 RAPH1Q70E73 1250 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CLNKQ7Z7G1 428 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 SLFN11Q7Z7L1 901 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 JAMLQ86YT9 394 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ZFP28Q8NHY6 868 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
SIX4-202ENST00000554079 COX4I2Q96KJ9 171 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 TMEM60Q9H2L4 133 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 CYLDQ9NQC7 956 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ARL8BQ9NVJ2 186 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 SELENONQ9NZV5 590 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 PPP1R9AQ9ULJ8 1098 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 ATP6V0A2Q9Y487 856 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 TRIM17Q9Y577 477 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 C5P01031 1676 aa10.17□□□□□ -0.78
SIX4-202ENST00000554079 RASA4BC9J798 803 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 F8W8V4 182 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 GOLGA8TH3BQL2 631 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RASA4O43374 803 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TRMUO75648 421 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 ZWINTO95229 277 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 GOLGA8HP0CJ92 632 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 CYP2C9P11712 490 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RARGP13631 454 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 MUTP22033 750 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RAP1GDS1P52306 607 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 CHN2P52757 468 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 WDR4P57081 412 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 RPL26P61254 145 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 PSMC1P62191 440 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 PLCB3Q01970 1234 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PTGDRQ13258 359 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TCIRG1Q13488 830 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 MED21Q13503 144 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms