RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PCYOX1Q9UHG3 505 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 HERC5Q9UII4 1024 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 GGA2Q9UJY4 613 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ASTN2O75129 1339 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 FOXO6A8MYZ6 492 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 MIF4GDA9UHW6 222 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CTNND1O60716 968 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RTN2O75298 545 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RARAP10276 462 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PLS3P13797 630 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 MMP13P45452 471 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 HSD17B4P51659 736 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 EIF3BP55884 814 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PEX3P56589 373 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SOX10P56693 466 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RASA3Q14644 834 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 TCEAL1Q15170 157 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SPDYCQ5MJ68 293 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 DAB2IPQ5VWQ8 1189 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 HAUS6Q7Z4H7 955 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 HOOK3Q86VS8 718 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLC13A5Q86YT5 568 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 UBL4BQ8N7F7 174 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CLEC4DQ8WXI8 215 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC127Q96BQ5 260 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF653Q96CK0 615 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CABS1Q96KC9 395 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF317Q96PQ6 595 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 ACCSQ96QU6 501 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RIT2Q99578 217 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 DDX23Q9BUQ8 820 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 AGO4Q9HCK5 861 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLC40A1Q9NP59 571 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 HOMER2Q9NSB8 354 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 HAUS2Q9NVX0 235 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCPG1Q9ULG6 757 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SYNPO2Q9UMS6 1093 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PFASO15067 1338 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RASSF9O75901 435 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 MTA2O94776 668 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 COILP38432 576 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CAP2P40123 477 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 MYBPC2Q14324 1141 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 NBPF9Q3BBW0 867 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 TKFCQ3LXA3 575 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SEL1L2Q5TEA6 688 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC121Q6ZUS5 278 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PHLDB2Q86SQ0 1253 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 C12orf56Q8IXR9 622 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CACNA2D3Q8IZS8 1091 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 TAS1R2Q8TE23 839 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 C7orf43Q8WVR3 580 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PSPC1Q8WXF1 523 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 SHC3Q92529 594 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 PGM2Q96G03 612 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 EHMT1Q9H9B1 1298 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 VEZTQ9HBM0 779 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 AAASQ9NRG9 546 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 LARSQ9P2J5 1176 aaKnown RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF70Q9UC06 446 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 RASAL2Q9UJF2 1139 aa7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZBTB12Q9Y330 459 aaPredicted RBP7.45□□□□□ -1.22
LINC-ROR-201ENST00000553704 CLDN3O15551 220 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PPIP5K2O43314 1243 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 RIPK2O43353 540 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SPOPO43791 374 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 RAD17O75943 681 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCNE2O96020 404 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CYP1A2P05177 515 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 P4HBP07237 508 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CYP11B1P15538 503 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 YWHABP31946 246 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHKAP35790 457 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PTGER2P43116 358 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SCTRP47872 440 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 MNAT1P51948 309 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 DRG2P55039 364 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 GTF2BQ00403 316 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SNRNP35Q16560 246 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CYP1B1Q16678 543 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 C2CD6Q53TS8 623 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLC39A4Q6P5W5 647 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CPLX4Q7Z7G2 160 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC25Q86WR0 208 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 LRRC34Q8IZ02 419 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 C3orf20Q8ND61 904 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 HELQQ8TDG4 1101 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 C1orf54Q8WWF1 131 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 ATG4AQ8WYN0 398 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 DDX1Q92499 740 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCT6BQ92526 530 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHMP6Q96FZ7 201 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 RPS6KC1Q96S38 1066 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 TMEM206Q9H813 350 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 DNAJC17Q9NVM6 304 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 TELO2Q9Y4R8 837 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PARP14Q460N5 1801 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SRCAPQ6ZRS2 3230 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms