RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CPEP16870 476 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 CTSSP25774 331 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 MGAT1P26572 445 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 ID4P47928 161 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 APBA1Q02410 837 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 PDCD1Q15116 288 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 SMN1Q16637 294 aaKnown RBP5.6□□□□□ -1.51
SCFD1-210ENST00000553693 TIGD2Q4W5G0 525 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 DRICH1Q6PGQ1 229 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-210ENST00000553693 KCNV1Q6PIU1 500 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 RHOUQ7L0Q8 258 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 ZNF627Q7L945 461 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 GPRIN1Q7Z2K8 1008 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 PROKR1Q8TCW9 393 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 EAF2Q96CJ1 260 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-210ENST00000553693 GPRC5DQ9NZD1 345 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 C11orf21Q9P2W6 132 aa5.6□□□□□ -1.51
SCFD1-210ENST00000553693 RPTORQ8N122 1335 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 CLSTN1O94985 981 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 MTHFD2P13995 350 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 CRHR1P34998 444 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
SCFD1-210ENST00000553693 FAPQ12884 760 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 PTPAQ15257 358 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 FAM180AQ6UWF9 173 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 ABHD15Q6UXT9 468 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 OR10H5Q8NGA6 315 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 DPP7Q9UHL4 492 aa5.59□□□□□ -1.51
SCFD1-210ENST00000553693 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 DIRC3C9JPN6 131 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 LAG3P18627 525 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-210ENST00000553693 MST1LQ2TV78 715 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 LAIR1Q6GTX8 287 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 GDF7Q7Z4P5 450 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 XYLT1Q86Y38 959 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 PLXDC1Q8IUK5 500 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 UBR7Q8N806 425 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 MDM1Q8TC05 714 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 AUTS2Q8WXX7 1259 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 TTPALQ9BTX7 342 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 SPON1Q9HCB6 807 aa5.58□□□□□ -1.52
SCFD1-210ENST00000553693 RNASET2O00584 256 aaKnown RBP5.57□□□□□ -1.52
SCFD1-210ENST00000553693 FOXN1O15353 648 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 RHOBTB3O94955 611 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 SPATA31D3P0C874 917 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 NR4A1P22736 598 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 MASP1P48740 699 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 EFCAB12Q6NXP0 572 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 BTNL9Q6UXG8 535 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 Q6ZPA2 131 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 SPATA31D4Q6ZUB0 917 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 STRA8Q7Z7C7 330 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
SCFD1-210ENST00000553693 AFAP1L2Q8N4X5 818 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 LILRA3Q8N6C8 439 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-210ENST00000553693 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 MYEOVQ96EZ4 313 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 TRPM5Q9NZQ8 1165 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 EDARQ9UNE0 448 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 DMRT1Q9Y5R6 373 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 HS3ST4Q9Y661 456 aa5.57□□□□□ -1.52
SCFD1-210ENST00000553693 ZMYM3Q14202 1370 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 AHRRA9YTQ3 701 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 AKR1B10O60218 316 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 RBP3P10745 1247 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 KRT4P19013 534 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 ECHS1P30084 290 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 FLT3LGP49771 235 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 STAT4Q14765 748 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 PRAMEF14Q5SWL7 426 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 MLST8Q9BVC4 326 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 QRSL1Q9H0R6 528 aaKnown RBP5.56□□□□□ -1.52
SCFD1-210ENST00000553693 POGKQ9P215 609 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 ZBTB21Q9ULJ3 1066 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 CHST2Q9Y4C5 530 aa5.56□□□□□ -1.52
SCFD1-210ENST00000553693 GOLGA8AA7E2F4 631 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 TBKBP1A7MCY6 615 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 PJA2O43164 708 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 CANXP27824 592 aaKnown RBP5.55□□□□□ -1.52
SCFD1-210ENST00000553693 CNGA1P29973 690 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 TMPRSS15P98073 1019 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 CDK17Q00537 523 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 NHLH2Q02577 135 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 FSTL1Q12841 308 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 BMT2Q1RMZ1 405 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 MUM1Q2TAK8 710 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 ANO4Q32M45 955 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 PCSK4Q6UW60 755 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 TSPEARQ8WU66 669 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 RIN2Q8WYP3 895 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-210ENST00000553693 FATE1Q969F0 183 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 ORAI2Q96SN7 254 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 BCO1Q9HAY6 547 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms