RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 DPP7Q9UHL4 492 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 H0Y858 1186 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 TBX3O15119 743 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ASAP2O43150 1006 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 EPB41L2O43491 1005 aaKnown RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ZNF623O75123 536 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 KRT2P35908 639 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 GLUD2P49448 558 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 TCF15Q12870 199 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 MXD4Q14582 209 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 EPHA7Q15375 998 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 CALCRLQ16602 461 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 STAMQ92783 540 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 MAN1C1Q9NR34 630 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-208ENST00000553370 IRAK3Q9Y616 596 aa11.03□□□□□ -0.64
ACTN1-208ENST00000553370 M0R2N6 131 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 EDIL3O43854 480 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 STBD1O95210 358 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 GLUD1P00367 558 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 MYBP10242 640 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 MLH1P40692 756 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 SCRN1Q12765 414 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 AGMOQ6ZNB7 445 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 C4orf19Q8IY42 314 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 ZDHHC14Q8IZN3 488 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 CPB2Q96IY4 423 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 KLHL5Q96PQ7 755 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 SMOC2Q9H3U7 446 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.65
ACTN1-208ENST00000553370 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 RGL1Q9NZL6 768 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 USTQ9Y2C2 406 aa11.02□□□□□ -0.65
ACTN1-208ENST00000553370 EP300Q09472 2414 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-208ENST00000553370 ARL5CA6NH57 179 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 NRP1O14786 923 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 SOD2P04179 222 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
ACTN1-208ENST00000553370 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
ACTN1-208ENST00000553370 AXLP30530 894 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 CLCN4P51793 760 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.65
ACTN1-208ENST00000553370 NPY5RQ15761 445 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 GPR149Q86SP6 731 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 SLC22A17Q8WUG5 538 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 GAD1Q99259 594 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 MINDY3Q9H8M7 445 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 IPPQ9Y573 584 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 GVINP1Q7Z2Y8 2422 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 VWA8A3KMH1 1905 aa11.01□□□□□ -0.65
ACTN1-208ENST00000553370 INPPL1O15357 1258 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 B4GALT3O60512 393 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 NEMFO60524 1076 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 TSPAN1O60635 241 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 USO1O60763 962 aaKnown RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 PFKFB2O60825 505 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 DGAT1O75907 488 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 DDHD2O94830 711 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 NPTXRO95502 500 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 SCNN1GP51170 649 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 CREMQ03060 361 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 TDGQ13569 410 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 MRPL10Q7Z7H8 261 aaKnown RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 TTC13Q8NBP0 860 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 HAS1Q92839 578 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 ZFP42Q96MM3 310 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 EIF2AK1Q9BQI3 630 aaKnown RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 EIF2AQ9BY44 585 aaKnown RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 CSRNP2Q9H175 543 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms