RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KANSL1Q7Z3B3 1105 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 DDX53Q86TM3 631 aaKnown RBP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 SYNE4Q8N205 404 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 CPT1CQ8TCG5 803 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 ARL8AQ96BM9 186 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PDLIM2Q96JY6 352 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PANK2Q9BZ23 570 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 ENKD1Q9H0I2 346 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 CHMP4BQ9H444 224 aaKnown RBP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PANK3Q9H999 370 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 KNSTRNQ9Y448 316 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 KANK1Q14678 1352 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 VIRMAQ69YN4 1812 aaKnown RBP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PRAG1Q86YV5 1406 aa3.96□□□□□ -1.77
CCNT1-203ENST00000550457 ERBINQ96RT1 1412 aa3.96□□□□□ -1.77
CCNT1-203ENST00000550457 ANKRD50Q9ULJ7 1429 aa3.96□□□□□ -1.77
CCNT1-203ENST00000550457 YEATS2Q9ULM3 1422 aa3.96□□□□□ -1.77
CCNT1-203ENST00000550457 CCDC163A0A0D9SF12 145 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 AHRRA9YTQ3 701 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 MTSS1O43312 755 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 DNAJC8O75937 253 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 RHOBTB3O94955 611 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 IGHDP01880 384 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 CYP17A1P05093 508 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 HSP90AB1P08238 724 aaKnown RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 CANXP27824 592 aaKnown RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 PPP2R1AP30153 589 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 BCAR1P56945 870 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 FAM193AP78312 1265 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 NUCB2P80303 420 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 FAM189BP81408 668 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 RBL2Q08999 1139 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 HDAC1Q13547 482 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 ZNF460Q14592 562 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 PTPAQ15257 358 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 DCAF17Q5H9S7 520 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 KCNV1Q6PIU1 500 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 WDR63Q8IWG1 891 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 LILRB2Q8N423 598 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 BEND2Q8NDZ0 799 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 TNPO1Q92973 898 aaKnown RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 ZNF764Q96H86 408 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 TESK2Q96S53 571 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 CPEB1Q9BZB8 566 aaKnown RBP3.96□□□□□ -1.78
CCNT1-203ENST00000550457 MTG2Q9H4K7 406 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 PCIF1Q9H4Z3 704 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 SYNPO2LQ9H987 977 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 ING3Q9NXR8 418 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 NUP155O75694 1391 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 PLEKHH1Q9ULM0 1364 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 FANCD2Q9BXW9 1451 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 CEP170Q5SW79 1584 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 COL4A3Q01955 1670 aa3.96□□□□□ -1.78
CCNT1-203ENST00000550457 WDR62O43379 1518 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 TOPBP1Q92547 1522 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 EIF2AK4Q9P2K8 1649 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ADGBQ8N7X0 1667 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 EIF4G3O43432 1585 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ABCC10Q5T3U5 1492 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 UQCRHLA0A096LP55 91 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 CENPVL1A0A0U1RR11 272 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 H7C1D1 291 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 PLD2O14939 933 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 DAPK3O43293 454 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 HOXA3O43365 443 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 LPXNO60711 386 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 SCAF4O95104 1147 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 UQCRHP07919 91 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 GAAP10253 952 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 GNAT2P19087 354 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 SLC9A1P19634 815 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 IGFALSP35858 605 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ADCY2Q08462 1091 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 C2orf27AQ580R0 203 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 HECTD2Q5U5R9 776 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 APBB1IPQ7Z5R6 666 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 SKAP1Q86WV1 359 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 PIK3C3Q8NEB9 887 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 RPGRQ92834 1020 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 BBC3Q96PG8 261 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 SRPK1Q96SB4 655 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ELF4Q99607 663 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 MYL10Q9BUA6 226 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 OSBPL6Q9BZF3 934 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 CFDP1Q9UEE9 299 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ZNHIT2Q9UHR6 403 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 ZKSCAN5Q9Y2L8 839 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 CCDC9Q9Y3X0 531 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 TNPO3Q9Y5L0 923 aaKnown RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 PRDM15P57071 1507 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 KIAA0586Q9BVV6 1533 aa3.95□□□□□ -1.78
CCNT1-203ENST00000550457 TROQ12816 1431 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-203ENST00000550457 CCDC141Q6ZP82 1450 aa3.94□□□□□ -1.78
CCNT1-203ENST00000550457 TRIM24O15164 1050 aa3.94□□□□□ -1.78
CCNT1-203ENST00000550457 OPHN1O60890 802 aa3.94□□□□□ -1.78
CCNT1-203ENST00000550457 PRPF6O94906 941 aaKnown RBP3.94□□□□□ -1.78
CCNT1-203ENST00000550457 TPM3P06753 285 aa3.94□□□□□ -1.78
CCNT1-203ENST00000550457 LMO1P25800 156 aa3.94□□□□□ -1.78
CCNT1-203ENST00000550457 CLK3P49761 638 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms