RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 OGTO15294 1046 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 B4GALT5O43286 388 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 RPS6KA5O75582 802 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 ADCY5O95622 1261 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 CHRNA1P02708 482 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 CKBP12277 381 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 ARF4P18085 180 aaPredicted RBP18.96■□□□□ 0.63
LETMD1-220ENST00000549686 CASP4P49662 377 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 ZNF75DP51815 510 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 MCCD1P59942 119 aaPredicted RBP18.96■□□□□ 0.63
LETMD1-220ENST00000549686 SNRNP35Q16560 246 aaKnown RBP18.96■□□□□ 0.63
LETMD1-220ENST00000549686 NECAB2Q7Z6G3 386 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.96■□□□□ 0.63
LETMD1-220ENST00000549686 BORCS6Q96GS4 357 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 PDZD7Q9H5P4 517 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 TAB2Q9NYJ8 693 aa18.96■□□□□ 0.63
LETMD1-220ENST00000549686 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.96■□□□□ 0.63
LETMD1-220ENST00000549686 LGALS16A8MUM7 142 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 PITPNM1O00562 1244 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 AP5Z1O43299 807 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 STX10O60499 249 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 CSDE1O75534 798 aaKnown RBP18.95■□□□□ 0.62
LETMD1-220ENST00000549686 CTSHP09668 335 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 CDC25BP30305 580 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 VWA3BQ502W6 1294 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 FKBP15Q5T1M5 1219 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 TMEM40Q8WWA1 233 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 XPO4Q9C0E2 1151 aaKnown RBP18.95■□□□□ 0.62
LETMD1-220ENST00000549686 RTN4Q9NQC3 1192 aaKnown RBP18.95■□□□□ 0.62
LETMD1-220ENST00000549686 CHST12Q9NRB3 414 aa18.95■□□□□ 0.62
LETMD1-220ENST00000549686 TTLL13PA6NNM8 815 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 PQBP1O60828 265 aaKnown RBP18.94■□□□□ 0.62
LETMD1-220ENST00000549686 PARNO95453 639 aaKnown RBP18.94■□□□□ 0.62
LETMD1-220ENST00000549686 SELPP16109 830 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 HOXA11P31270 313 aaPredicted RBP18.94■□□□□ 0.62
LETMD1-220ENST00000549686 BFSP1Q12934 665 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 NR1I3Q14994 352 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 SURF1Q15526 300 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 FBXO47Q5MNV8 452 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 ZNF618Q5T7W0 954 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 SLC27A1Q6PCB7 646 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 FAM228AQ86W67 206 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 TMC2Q8TDI7 906 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 SAAL1Q96ER3 474 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 ZBTB45Q96K62 511 aaPredicted RBP18.94■□□□□ 0.62
LETMD1-220ENST00000549686 MFSD14AQ96MC6 490 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 FAM213AQ9BRX8 229 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 CDT1Q9H211 546 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 USP20Q9Y2K6 914 aa18.94■□□□□ 0.62
LETMD1-220ENST00000549686 NOC2LQ9Y3T9 749 aaKnown RBP18.94■□□□□ 0.62
LETMD1-220ENST00000549686 VAMP7P51809 220 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 ATN1P54259 1190 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 EEF1DP3Q658K8 133 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 CBWD2Q8IUF1 395 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 CPB2Q96IY4 423 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 PAWRQ96IZ0 340 aaKnown RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 HAPLN2Q9GZV7 340 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 VPS16Q9H269 839 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 NDST4Q9H3R1 872 aa18.93■□□□□ 0.62
LETMD1-220ENST00000549686 PIN4Q9Y237 131 aaKnown RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 TRIP12Q14669 1992 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-220ENST00000549686 GOLGA8IPA6NC78 632 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 GOLGA8JA6NMD2 632 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 FAM189A1O60320 539 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 N4BP1O75113 896 aaKnown RBP18.92■□□□□ 0.62
LETMD1-220ENST00000549686 AFPP02771 609 aaKnown RBP18.92■□□□□ 0.62
LETMD1-220ENST00000549686 CLTAP09496 248 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
LETMD1-220ENST00000549686 FGFR4P22455 802 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 GTF2H1P32780 548 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 CYP24A1Q07973 514 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 PAK2Q13177 524 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 PSMD6Q15008 389 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 TRIM60Q495X7 471 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 MIIPQ5JXC2 388 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 LRRC8DQ7L1W4 858 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 ZBTB33Q86T24 672 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 BRSK2Q8IWQ3 736 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 RDH13Q8NBN7 331 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 ERVK-5Q9HDB9 667 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 RBAKQ9NYW8 714 aaPredicted RBP18.92■□□□□ 0.62
LETMD1-220ENST00000549686 CPSF3Q9UKF6 684 aaKnown RBP18.92■□□□□ 0.62
LETMD1-220ENST00000549686 ST3GAL5Q9UNP4 418 aa18.92■□□□□ 0.62
LETMD1-220ENST00000549686 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 PES1O00541 588 aaKnown RBP18.91■□□□□ 0.62
LETMD1-220ENST00000549686 ADRB2P07550 413 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 GRM5P41594 1212 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 UBXN1Q04323 297 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 TLE2Q04725 743 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 CCDC173Q0VFZ6 552 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 LPIN1Q14693 890 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 DCAF17Q5H9S7 520 aaPredicted RBP18.91■□□□□ 0.62
LETMD1-220ENST00000549686 TCERG1LQ5VWI1 586 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 TRAF7Q6Q0C0 670 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 SLC35C1Q96A29 364 aa18.91■□□□□ 0.62
LETMD1-220ENST00000549686 TRIM6Q9C030 488 aaPredicted RBP18.91■□□□□ 0.62
LETMD1-220ENST00000549686 GTPBP10A4D1E9 387 aaKnown RBP18.9■□□□□ 0.62
LETMD1-220ENST00000549686 PMM2O15305 246 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms