RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 C4orf19Q8IY42 314 aa9.85□□□□□ -0.83
PPFIA2-216ENST00000549396 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
PPFIA2-216ENST00000549396 NSMCE4AQ9NXX6 385 aa9.85□□□□□ -0.83
PPFIA2-216ENST00000549396 KANSL3Q9P2N6 904 aa9.85□□□□□ -0.83
PPFIA2-216ENST00000549396 FAN1Q9Y2M0 1017 aa9.85□□□□□ -0.83
PPFIA2-216ENST00000549396 DCDC2CA8MYV0 355 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 VIL1P09327 827 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 GDAQ9Y2T3 454 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 MAP3K7O43318 606 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 KRT38O76015 456 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 CYP2C9P11712 490 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ATF7IP2Q5U623 682 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 TMEM270Q6UE05 265 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 RCOR2Q8IZ40 523 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 KIF2CQ99661 725 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 DESI2Q9BSY9 194 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 MRPL40Q9NQ50 206 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 PIN4Q9Y237 131 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 GOLGA8IPA6NC78 632 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 GOLGA8JA6NMD2 632 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 HSD17B4P51659 736 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 CXCL9Q07325 125 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ARHGAP15Q53QZ3 475 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 SHC4Q6S5L8 630 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 CYFIP1Q7L576 1253 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 YAF2Q8IY57 180 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 RAB42Q8N4Z0 105 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 KRT17Q04695 432 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 EFHC1Q5JVL4 640 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 KAZNQ674X7 775 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 RYBPQ8N488 228 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ZNF564Q8TBZ8 553 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ASAP3Q8TDY4 903 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 AGXT2Q9BYV1 514 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ZNF518BQ9C0D4 1074 aa9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 XRN1Q8IZH2 1706 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-216ENST00000549396 DYNC1LI2O43237 492 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 DRAP1Q14919 205 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 IQCB1Q15051 598 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 LMNTD2Q8IXW0 634 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GRAMD1CQ8IYS0 662 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 CEP120Q8N960 986 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SHCBP1Q8NEM2 672 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 TMEM39BQ9GZU3 492 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 Q9H521 79 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 ANAPC7Q9UJX3 599 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 KDM1AO60341 852 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SUN1O94901 812 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GSTA1P08263 222 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GSTA2P09210 222 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 ODC1P11926 461 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GCLMP48507 274 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GUCY2DQ02846 1103 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 BSPRYQ5W0U4 402 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 PHLDB3Q6NSJ2 640 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 MKL1Q969V6 931 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 KPNA7A9QM74 516 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 KPNA1P52294 538 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 ARPP19P56211 112 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 PSMC1P62191 440 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 TAF2Q6P1X5 1199 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SMYD4Q8IYR2 804 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SEPT8Q92599 483 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 ATG4CQ96DT6 458 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 RSRC1Q96IZ7 334 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 FAM217BQ9NTX9 383 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 EMSYQ7Z589 1322 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 LMO7Q8WWI1 1683 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 MT-ND3P03897 115 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 C6orf222P0C671 652 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 CPB1P15086 417 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 OSTNP61366 133 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 DACT2Q5SW24 774 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 CC2D1AQ6P1N0 951 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 ZNF410Q86VK4 478 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 IFT43Q96FT9 208 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 KCNH7Q9NS40 1196 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SNAP23O00161 211 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SPAG6O75602 509 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 CREMQ03060 361 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 RILPQ96NA2 401 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 NIF3L1Q9GZT8 377 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SPTLC3Q9NUV7 552 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 SENP1Q9P0U3 644 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 NFU1Q9UMS0 254 aa9.83□□□□□ -0.84
PPFIA2-216ENST00000549396 NFAT5O94916 1531 aa9.82□□□□□ -0.84
PPFIA2-216ENST00000549396 AKAP12Q02952 1782 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms